RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ADAM30Q9UKF2 790 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 AP4E1Q9UPM8 1137 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 MRVI1Q9Y6F6 885 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 PRAMEF27A3QJZ7 478 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 APBA3O96018 575 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 PLCG1P19174 1290 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 COL8A1P27658 744 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 GRK4P32298 578 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 TNNI3KQ59H18 835 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 TMEM201Q5SNT2 666 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 ZBTB37Q5TC79 503 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 NBPF6Q5VWK0 638 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 C12orf50Q8NA57 414 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 RNF214Q8ND24 703 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 NBPF4Q96M43 638 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 FANCD2OSQ96PS1 177 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 DISC1Q9NRI5 854 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 PRKAG3Q9UGI9 489 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 USP21Q9UK80 565 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 CORINQ9Y5Q5 1042 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 MEIS3P2A8K0S8 358 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 PGRP06401 933 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 ETF1P62495 437 aaKnown RBP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 Q6ZS46 218 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 DYMQ7RTS9 669 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 LSRQ86X29 649 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 FAM181BA6NEQ2 426 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 SMAD7O15105 426 aaKnown RBP6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 DRD2P14416 443 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 ANKS3Q6ZW76 656 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 DPH6Q7L8W6 267 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 FAM169BQ8N8A8 192 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 C2CD4AQ8NCU7 369 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 PMFBP1Q8TBY8 1022 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 TMEM40Q8WWA1 233 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 LNPKQ9C0E8 428 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 PIDD1Q9HB75 910 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 GMIPQ9P107 970 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 ALX3O95076 343 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 GLB1P16278 677 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 NTF4P34130 210 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 ASPAP45381 313 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 PREPP48147 710 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 TTLL4Q14679 1199 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 HID1Q8IV36 788 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 C19orf47Q8N9M1 422 aaKnown RBP6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 R3HCC1Q9Y3T6 440 aaKnown RBP6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 ACTL7BQ9Y614 415 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLC22A31A6NKX4 558 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 KLF4O43474 513 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 GAS2O43903 313 aaKnown RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 NEFMP07197 916 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 HCLS1P14317 486 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 NOS3P29474 1203 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 IREB2P48200 963 aaKnown RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 CASP7P55210 303 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 ADGRE1Q14246 886 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 MBTPS1Q14703 1052 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 OVOS1Q6IE37 1185 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 CDC37L1Q7L3B6 337 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 MCATQ8IVS2 390 aaKnown RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 TAB3Q8N5C8 712 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 ACSF2Q96CM8 615 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 TM9SF2Q99805 663 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 ANTXR1Q9H6X2 564 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 TJP2Q9UDY2 1190 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 RNGTTO60942 597 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 CAP2P40123 477 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 RAB33AQ14088 237 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 UVSSAQ2YD98 709 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 CDCP2Q5VXM1 449 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 INTS3Q68E01 1043 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLC6A19Q695T7 634 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 MRPL41Q8IXM3 137 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SMYD4Q8IYR2 804 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 ISL2Q96A47 359 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 ATG4CQ96DT6 458 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 FAM46AQ96IP4 442 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 TMEM87BQ96K49 555 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 OSBPL2Q9H1P3 480 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 CNNM2Q9H8M5 875 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 ACTR10Q9NZ32 417 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SIRPGQ9P1W8 387 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SHROOM4Q9ULL8 1493 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 U2SURPO15042 1029 aaKnown RBP6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 DNAJA2O60884 412 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 NME1P15531 152 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms