RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 CACNB2Q08289 660 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 MAP3K12Q12852 859 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCDC27Q2M243 656 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 RABL6Q3YEC7 729 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 LRRC24Q50LG9 513 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SH3D19Q5HYK7 790 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 C9orf50Q5SZB4 431 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLC4A10Q6U841 1118 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SH3BP5LQ7L8J4 393 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCDC84Q86UT8 332 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 WWC1Q8IX03 1113 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLF2Q8IX21 1173 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZGPATQ8N5A5 531 aaKnown RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 VGLL2Q8N8G2 317 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 ARRDC4Q8NCT1 418 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 IL27Q8NEV9 243 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 GTF3C2Q8WUA4 911 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 LPIN2Q92539 896 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 LPAR1Q92633 364 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 EDC3Q96F86 508 aaKnown RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 FAM163AQ96GL9 167 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SUCLG2Q96I99 432 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 P2RX7Q99572 595 aaKnown RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 APBA2Q99767 749 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SRCIN1Q9C0H9 1055 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 OSBPL5Q9H0X9 879 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 TTYH1Q9H313 450 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 CWC22Q9HCG8 908 aaKnown RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 TMOD4Q9NZQ9 345 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 DDX20Q9UHI6 824 aaKnown RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 RAPGEFL1Q9UHV5 662 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 DENND2AQ9ULE3 1009 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATP11BQ9Y2G3 1177 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 LAMB1P07942 1786 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 DOCK3Q8IZD9 2030 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATRNL1Q5VV63 1379 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 COL2A1P02458 1487 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 GAKO14976 1311 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 IL16Q14005 1332 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 SALL1Q9NSC2 1324 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 FAM196BA6NMK8 535 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 C19orf81C9J6K1 198 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L10C9JJH3 530 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 KBTBD13C9JR72 458 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 EYA2O00167 538 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 NPM3O75607 178 aaKnown RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 MAP4K4O95819 1239 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ASNSP08243 561 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 NBPF7P0C2Y1 421 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLURP2P0DP57 97 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 CNGA1P29973 690 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 CAP2P40123 477 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 BTDP43251 543 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 BACE1P56817 501 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 HERVK_113P62684 666 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ERVK-9P63128 1117 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ERVK-24P63145 666 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 MRPS5P82675 430 aaKnown RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATP2B2Q01814 1243 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 MAP2K5Q13163 448 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 PICALMQ13492 652 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 MTMR2Q13614 643 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 GRIN2CQ14957 1233 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCL14Q16627 93 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATP2B3Q16720 1220 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 Q3C1V9 767 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 MORN1Q5T089 497 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 SPTY2D1Q68D10 685 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLC39A5Q6ZMH5 540 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 GPR142Q7Z601 462 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 PLEKHH3Q7Z736 793 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 DZIP1Q86YF9 867 aaKnown RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP38Q8NB14 1042 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 KLHDC4Q8TBB5 520 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ADAMTS19Q8TE59 1207 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 PPM1EQ8WY54 764 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP6NLQ92738 828 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 BADQ92934 168 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 KAZALD1Q96I82 304 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 RNPC3Q96LT9 517 aaKnown RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ASB2Q96Q27 587 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 UHRF1Q96T88 793 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 GAS2L1Q99501 681 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 WDR18Q9BV38 432 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 C1QTNF1Q9BXJ1 281 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 PORCNQ9H237 461 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZNF576Q9H609 170 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 BICC1Q9H694 974 aaKnown RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 TXNRD2Q9NNW7 524 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 DDX4Q9NQI0 724 aaKnown RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 PRDM5Q9NQX1 630 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 CEP126Q9P2H0 1117 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 THEGQ9P2T0 379 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 RBPJLQ9UBG7 517 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ABCF2Q9UG63 623 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 HERC5Q9UII4 1024 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms