RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 FANCBQ8NB91 859 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 NAT10Q9H0A0 1025 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 HPSEQ9Y251 543 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 NHSQ6T4R5 1651 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 GNPATO15228 680 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 PFKFB1P16118 471 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 RBM6P78332 1123 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 MRFAP1L1Q96HT8 127 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 BPIFA3Q9BQP9 254 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 UBAC1Q9BSL1 405 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 UBE2Q2LH0YL09 131 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 DEXIO95424 95 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 MMP1P03956 469 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 TM4SF1P30408 202 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 GUCY1A2P33402 732 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 THSD7AQ9UPZ6 1657 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 BECN2A8MW95 431 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 MARCKSP29966 332 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 DYNLL1P63167 89 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 CCDC186Q7Z3E2 898 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 CCNL1Q9UK58 526 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-207ENST00000394801 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 PTGS1P23219 599 aa17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 HIBADHP31937 336 aaKnown RBP17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 ARHGEF1Q92888 912 aaKnown RBP17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 PYCARDQ9ULZ3 195 aa17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 TNKSO95271 1327 aa17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 KLRK1P26718 216 aa17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 SHC4Q6S5L8 630 aa17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 ERCC4Q92889 916 aaPredicted RBP17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 MAP7D2Q96T17 732 aa17.72■□□□□ 0.43
UBE2D3-207ENST00000394801 MROH7-TTC4A0A0A0MT08 1334 aa17.71■□□□□ 0.43
UBE2D3-207ENST00000394801 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
UBE2D3-207ENST00000394801 RESP18Q5W5W9 173 aa17.71■□□□□ 0.43
UBE2D3-207ENST00000394801 DUOX1Q9NRD9 1551 aa17.71■□□□□ 0.43
UBE2D3-207ENST00000394801 BTBD18B2RXH4 712 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 CUTAO60888 179 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 SYKP43405 635 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 MECOMQ03112 1051 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 CTR9Q6PD62 1173 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 DRC7Q8IY82 874 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 STK11IPQ8N1F8 1099 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 ZSCAN10Q96SZ4 725 aaPredicted RBP17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 CLIP2Q9UDT6 1046 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 USP21Q9UK80 565 aa17.71■□□□□ 0.42
UBE2D3-207ENST00000394801 IRS2Q9Y4H2 1338 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 A0A087WWV3 80 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 UBAP1LF5GYI3 381 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 SMIM22K7EJ46 135 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 IGSF3O75054 1194 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 C17orf53Q8N3J3 647 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 NRBP1Q9UHY1 535 aa17.7■□□□□ 0.42
UBE2D3-207ENST00000394801 NLRP12P59046 1061 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 TUBE1Q9UJT0 475 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 LY75O60449 1722 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 BAZ2AQ9UIF9 1905 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 TOB1P50616 345 aaPredicted RBP17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 DPCR1Q3MIW9 517 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 RILPL1Q5EBL4 403 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 ATP8A2Q9NTI2 1148 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.69■□□□□ 0.421e-8■□□□□ 9.1
UBE2D3-207ENST00000394801 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 MYH13Q9UKX3 1938 aa17.69■□□□□ 0.42
UBE2D3-207ENST00000394801 IQCA1Q86XH1 822 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 ELOA2Q8IYF1 753 aaPredicted RBP17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 KCNJ14Q9UNX9 436 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 SPATA31A6Q5VVP1 1343 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 MYH2Q9UKX2 1941 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 USP17L21D6R901 530 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 ORC4O43929 436 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 FUT2Q10981 343 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 ZRSR1Q15695 479 aaKnown RBP17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 AOPEPQ8N6M6 819 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 DCP1AQ9NPI6 582 aaPredicted RBP17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 TFCP2L1Q9NZI6 479 aa17.68■□□□□ 0.42
UBE2D3-207ENST00000394801 CYP2D7A0A087X1C5 515 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 TROAPQ12815 778 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 KRI1Q8N9T8 703 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 MORC2Q9Y6X9 1032 aaPredicted RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 DLEC1Q9Y238 1755 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CALM1P0DP23 149 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CALM2P0DP24 149 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CALM3P0DP25 149 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms