RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RGS12O14924 1447 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 CUTAO60888 179 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 PPP2R3AQ06190 1150 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 KARSQ15046 597 aaKnown RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 CHST3Q7LGC8 479 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 KBTBD3Q8NAB2 608 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 A6NNZ2 444 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 EYA2O00167 538 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 TBCAO75347 108 aaKnown RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 FANCCQ00597 558 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 TUBB8Q3ZCM7 444 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 TNNI3KQ59H18 835 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 SSH3Q8TE77 659 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 MMRN2Q9H8L6 949 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 VAT1LQ9HCJ6 419 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 FPGT-TNNI3KV9GXZ4 949 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 GSPT1P15170 499 aaKnown RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 UBXN1Q04323 297 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 CTNNBL1Q8WYA6 563 aaPredicted RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 DNAI2Q9GZS0 605 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 SLC52A2Q9HAB3 445 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 KCNH3Q9ULD8 1083 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 ASAP1Q9ULH1 1129 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 GUCA1BQ9UMX6 200 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 RXRBP28702 533 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 TBC1D5Q92609 795 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 METTL22Q9BUU2 404 aaPredicted RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 NSRP1Q9H0G5 558 aaKnown RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 C6orf50Q9HD87 102 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.47□□□□□ -0.892e-7■■■■□ 22.5
VPS36-201ENST00000378060 ADAMTS7Q9UKP4 1686 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 HLA-DOAP06340 250 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 ZNF853P0CG23 659 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 STX17P56962 302 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 PPP2R5BQ15173 497 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 PIGBQ92521 554 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 APPBP2Q92624 585 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 STMN4Q9H169 189 aaPredicted RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 RBM28Q9NW13 759 aaKnown RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 VPS18Q9P253 973 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 ANGEL1Q9UNK9 670 aaKnown RBP9.47□□□□□ -0.89
VPS36-201ENST00000378060 TSPY3P0CV98 308 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 TSPY8P0CW00 308 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 NLRP12P59046 1061 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 PPP4R3AQ6IN85 833 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 DTHD1Q6ZMT9 781 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 ATRIPQ8WXE1 791 aa9.47□□□□□ -0.89
VPS36-201ENST00000378060 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.89
VPS36-201ENST00000378060 TSGA10Q9BZW7 698 aa9.46□□□□□ -0.89
VPS36-201ENST00000378060 PUF60Q9UHX1 559 aaKnown RBP9.46□□□□□ -0.89
VPS36-201ENST00000378060 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.89
VPS36-201ENST00000378060 MAGEB6P1A0A0J9YX57 407 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 ZNF202O95125 648 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 DEXIO95424 95 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 GNA11P29992 359 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 KRT79Q5XKE5 535 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 IGSF22Q8N9C0 903 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 FAM227BQ96M60 508 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 OSBPL3Q9H4L5 887 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 USP37Q86T82 979 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 FMNL3Q8IVF7 1028 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 SYCP3Q8IZU3 236 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 PLBD2Q8NHP8 589 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 ANTXR1Q9H6X2 564 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 KDM3BQ7LBC6 1761 aa9.46□□□□□ -0.9
VPS36-201ENST00000378060 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.92e-6■□□□□ 10.4
VPS36-201ENST00000378060 NAPAP54920 295 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 CCDC122Q5T0U0 273 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 OTUD6BQ8N6M0 293 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 NAPGQ99747 312 aaPredicted RBP9.45□□□□□ -0.9
VPS36-201ENST00000378060 DBNDD2Q9BQY9 259 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 C5P01031 1676 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 A0A1B0GUL7 405 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 RHOXF2BP0C7M4 288 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 HEATR3Q7Z4Q2 680 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 GAS2L3Q86XJ1 694 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 TMTC1Q8IUR5 882 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 DRC1Q96MC2 740 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 RHOXF2Q9BQY4 288 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 MACROD2A1Z1Q3 448 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 ATP5JP18859 108 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 PLCD1P51178 756 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 TNNC1P63316 161 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
VPS36-201ENST00000378060 CHMP4BP1P59074 171 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 ZNF790Q6PG37 636 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 CCDC129Q6ZRS4 1044 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 CARD6Q9BX69 1037 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 RASSF4Q9H2L5 321 aa9.45□□□□□ -0.9
VPS36-201ENST00000378060 STAP2Q9UGK3 403 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms