RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ATP2A1O14983 1001 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 MAGEA1P43355 309 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 IP6K1Q92551 441 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 EXOC5O00471 708 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 HLA-DOAP06340 250 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 GNGT1P63211 74 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 LETM2Q2VYF4 491 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 ATP8B1O43520 1251 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 MAP2K2P36507 400 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 ATP11AP98196 1134 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 C11orf57Q6ZUT1 292 aaPredicted RBP17.81■□□□□ 0.44
COL17A1-202ENST00000369733 ARMT1Q9H993 441 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 MTUS1Q9ULD2 1270 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 PPARDQ03181 441 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 VWA3BQ502W6 1294 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 INTS8Q75QN2 995 aaKnown RBP17.81■□□□□ 0.44
COL17A1-202ENST00000369733 PLBD2Q8NHP8 589 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 FAM71BQ8TC56 605 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
COL17A1-202ENST00000369733 SEC62Q99442 399 aaKnown RBP17.81■□□□□ 0.44
COL17A1-202ENST00000369733 E7EVH7 732 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 DCAF17Q5H9S7 520 aaPredicted RBP17.8■□□□□ 0.44
COL17A1-202ENST00000369733 SERPINA10Q9UK55 444 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 UTP11Q9Y3A2 253 aaKnown RBP17.8■□□□□ 0.44
COL17A1-202ENST00000369733 GJC1P36383 396 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 ZNF594Q96JF6 807 aaPredicted RBP17.8■□□□□ 0.44
COL17A1-202ENST00000369733 TRIM7Q9C029 511 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 KLHL7Q8IXQ5 586 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 STAMQ92783 540 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 BLZF1Q9H2G9 400 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 C6orf229H3BNL8 230 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 GCKRQ14397 625 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 NAP1L3Q99457 506 aaPredicted RBP17.8■□□□□ 0.44
COL17A1-202ENST00000369733 MED4Q9NPJ6 270 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 CEP83Q9Y592 693 aa17.8■□□□□ 0.44
COL17A1-202ENST00000369733 NKIRAS1Q9NYS0 192 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 SEL1L2Q5TEA6 688 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 SMC6Q96SB8 1091 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 CAPN7Q9Y6W3 813 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 DISP1Q96F81 1524 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 ZNF790Q6PG37 636 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 FCHSD1Q86WN1 690 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 DCAF5Q96JK2 942 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 ASIC2Q16515 512 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 EAF2Q96CJ1 260 aaPredicted RBP17.79■□□□□ 0.44
COL17A1-202ENST00000369733 ATP6V0A2Q9Y487 856 aa17.79■□□□□ 0.44
COL17A1-202ENST00000369733 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 TSKSQ9UJT2 592 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 USP37Q86T82 979 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 SPATA24Q86W54 205 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 CCDC65Q8IXS2 484 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 BICD1Q96G01 975 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 CLIC4Q9Y696 253 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 STX10O60499 249 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 FAM13AO94988 1023 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 EEF2P13639 858 aaKnown RBP17.78■□□□□ 0.44
COL17A1-202ENST00000369733 ATP5DP30049 168 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 SCRN1Q12765 414 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 GPIHBP1Q8IV16 184 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 SPTLC3Q9NUV7 552 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
COL17A1-202ENST00000369733 CTDSPL2Q05D32 466 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 CCDC160A6NGH7 325 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 GOLGA8KD6RF30 607 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 ACTN4O43707 911 aaKnown RBP17.78■□□□□ 0.44
COL17A1-202ENST00000369733 HS2ST1Q7LGA3 356 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 MAP4K1Q92918 833 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
COL17A1-202ENST00000369733 STIM2Q9P246 746 aa17.78■□□□□ 0.44
COL17A1-202ENST00000369733 CEP104O60308 925 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
COL17A1-202ENST00000369733 TRIM31Q9BZY9 425 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 WDR7Q9Y4E6 1490 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 PHLPP2Q6ZVD8 1323 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 ASXL2Q76L83 1435 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.44
COL17A1-202ENST00000369733 PAXIP1Q6ZW49 1069 aaPredicted RBP17.77■□□□□ 0.44
COL17A1-202ENST00000369733 OR8K1Q8NGG5 319 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 CAPS2Q9BXY5 557 aa17.77■□□□□ 0.44
COL17A1-202ENST00000369733 A0A1W2PQ27 194 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 A0A1W2PQ64 194 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 A0A1W2PQD8 194 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 LIG3P49916 1009 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 ZNF827Q17R98 1081 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 RRP15Q9Y3B9 282 aaKnown RBP17.77■□□□□ 0.43
COL17A1-202ENST00000369733 ADCY9O60503 1353 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 ERVK-7P63135 1459 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 RPL13P26373 211 aaKnown RBP17.77■□□□□ 0.43
COL17A1-202ENST00000369733 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.43
COL17A1-202ENST00000369733 TYW1BQ6NUM6 668 aa17.76■□□□□ 0.43
COL17A1-202ENST00000369733 KCNJ18B7U540 433 aa17.76■□□□□ 0.43
COL17A1-202ENST00000369733 KCNJ12Q14500 433 aa17.76■□□□□ 0.43
COL17A1-202ENST00000369733 NBPF14Q5TI25 921 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms