RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 RUFY1Q96T51 708 aa9.63□□□□□ -0.87
PTPRK-206ENST00000368215 LZTFL1Q9NQ48 299 aa9.63□□□□□ -0.87
PTPRK-206ENST00000368215 RNF216Q9NWF9 866 aaPredicted RBP9.63□□□□□ -0.87
PTPRK-206ENST00000368215 POLR3GO15318 223 aaPredicted RBP9.62□□□□□ -0.87
PTPRK-206ENST00000368215 IGSF3O75054 1194 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 CALML3P27482 149 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 KIF23Q02241 960 aaPredicted RBP9.62□□□□□ -0.87
PTPRK-206ENST00000368215 FKBP15Q5T1M5 1219 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 MAPKAPK5Q8IW41 473 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 IQUBQ8NA54 791 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 CCDC148Q8NFR7 591 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
PTPRK-206ENST00000368215 SLU7O95391 586 aaKnown RBP9.62□□□□□ -0.87
PTPRK-206ENST00000368215 CMA1P23946 247 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 ASIC1P78348 528 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 POSTNQ15063 836 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 TTC38Q5R3I4 469 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 TRMT1LQ7Z2T5 733 aaKnown RBP9.62□□□□□ -0.87
PTPRK-206ENST00000368215 TBC1D10CQ8IV04 446 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 TEX11Q8IYF3 940 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 FAM193AP78312 1265 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 TFAP4Q01664 338 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 CCDC181Q5TID7 509 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 RAB34Q9BZG1 259 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 MED23Q9ULK4 1368 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 LETM2Q2VYF4 491 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 ERFEQ4G0M1 354 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 CACNA2D4Q7Z3S7 1137 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 ZNF397Q8NF99 534 aaPredicted RBP9.62□□□□□ -0.87
PTPRK-206ENST00000368215 PDLIM2Q96JY6 352 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 EXOC1Q9NV70 894 aa9.62□□□□□ -0.87
PTPRK-206ENST00000368215 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 TRIM21P19474 475 aaKnown RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 NR5A1Q13285 461 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 DTHD1Q6ZMT9 781 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 TDRD7Q8NHU6 1098 aaKnown RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 TGFBRAP1Q8WUH2 860 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 SH2B2O14492 632 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 SPA17Q15506 151 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 VPS16Q9H269 839 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 BLZF1Q9H2G9 400 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 ERLIN1O75477 346 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 TNNI2P48788 182 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 SLC39A14Q15043 492 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 TDRD12Q587J7 1177 aaKnown RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 UIMC1Q96RL1 719 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 STRBPQ96SI9 672 aaKnown RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 RMND1Q9NWS8 449 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 CTNND2Q9UQB3 1225 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 SMIM5Q71RC9 77 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
PTPRK-206ENST00000368215 BAG1Q99933 345 aaPredicted RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 ZC3H12CQ9C0D7 883 aaKnown RBP9.61□□□□□ -0.87
PTPRK-206ENST00000368215 PYM1Q9BRP8 204 aaKnown RBP9.6□□□□□ -0.87
PTPRK-206ENST00000368215 GOLPH3LQ9H4A5 285 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 PCDHA5Q9Y5H7 936 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 UTYO14607 1347 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 PSMA7O14818 248 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 HLA-DOAP06340 250 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 AMPD3Q01432 767 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 CTAGE1Q96RT6 745 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 FANCLQ9NW38 375 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 A0A1W2PQ27 194 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 A0A1W2PQ64 194 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 A0A1W2PQD8 194 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 GOLGA6L9A6NEM1 432 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 ARID5BQ14865 1188 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-206ENST00000368215 LRRC8AQ8IWT6 810 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 TMOD2Q9NZR1 351 aa9.6□□□□□ -0.87
PTPRK-206ENST00000368215 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-206ENST00000368215 ERVV-1B6SEH8 477 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 UBXN1Q04323 297 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GOLGA8FQ08AF8 430 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GOLGA8DPQ0D2H9 430 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 TSGA10IPQ3SY00 556 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GRAMD1CQ8IYS0 662 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 RRP36Q96EU6 259 aaKnown RBP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 GPCPD1Q9NPB8 672 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 CCDC40Q4G0X9 1142 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 KRBA2Q6ZNG9 492 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 IGSF22Q8N9C0 903 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 KIAA1524Q8TCG1 905 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 TSG101Q99816 390 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 SEPT11Q9NVA2 429 aaKnown RBP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 SRP68Q9UHB9 627 aaKnown RBP9.59□□□□□ -0.87
PTPRK-206ENST00000368215 NEDD4P46934 1319 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 COBLO75128 1261 aa9.59□□□□□ -0.87
PTPRK-206ENST00000368215 CCDC175P0C221 793 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms