RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 VPS18Q9P253 973 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 PHACTR2O75167 634 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 CIAO1O76071 339 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 TUBB4BP68371 445 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 ARID5AQ03989 594 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 PPARAQ07869 468 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 RESTQ13127 1097 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 PAK1Q13153 545 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 SAP30BPQ9UHR5 308 aaKnown RBP13.18□□□□□ -0.3
COPA-202ENST00000368069 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
COPA-202ENST00000368069 GREM2Q9H772 168 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 HSF2BPO75031 334 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 SPECC1LQ69YQ0 1117 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 KIAA1524Q8TCG1 905 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 TTC14Q96N46 770 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
COPA-202ENST00000368069 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 ADKP55263 362 aaKnown RBP13.18□□□□□ -0.3
COPA-202ENST00000368069 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 RCOR1Q9UKL0 485 aa13.18□□□□□ -0.3
COPA-202ENST00000368069 TTF2Q9UNY4 1162 aaKnown RBP13.18□□□□□ -0.3
COPA-202ENST00000368069 BTBD18B2RXH4 712 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 CAPN2P17655 700 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 PLCD1P51178 756 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 ZNF827Q17R98 1081 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 PLCG2P16885 1265 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 PHKA1P46020 1223 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 TBC1D8BQ0IIM8 1120 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 CETN1Q12798 172 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 TRIM14Q14142 442 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 SEPT7Q16181 437 aaKnown RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 CYP2E1P05181 493 aaPredicted RBP13.17□□□□□ -0.3
COPA-202ENST00000368069 CRB1P82279 1406 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 PDE4DQ08499 809 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 CYP26C1Q6V0L0 522 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
COPA-202ENST00000368069 MACROD2A1Z1Q3 448 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 CACTINQ8WUQ7 758 aaKnown RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 TOB2Q14106 344 aaPredicted RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 IFI16Q16666 785 aaKnown RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 FANCLQ9NW38 375 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 GOLGA6L7A0A1B0GV03 622 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 DPCR1Q3MIW9 517 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 CDC25BP30305 580 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 UBE3CQ15386 1083 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 HDXQ7Z353 690 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
COPA-202ENST00000368069 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
COPA-202ENST00000368069 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 KRT9P35527 623 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 BCAMP50895 628 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 RSPH14Q9UHP6 348 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 MAP3K15Q6ZN16 1313 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 GNPATO15228 680 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 CSGALNACT2Q8N6G5 542 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 SDR42E1Q8WUS8 393 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 PDE8BO95263 885 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 ERCC6LQ2NKX8 1250 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 FAM47AQ5JRC9 791 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 TMTC1Q8IUR5 882 aa13.15□□□□□ -0.3
COPA-202ENST00000368069 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms