RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 KDM6AO15550 1401 aaPredicted RBP16.17■□□□□ 0.18
PARP1-203ENST00000366794 FOXN1O15353 648 aa16.17■□□□□ 0.18
PARP1-203ENST00000366794 BAG3O95817 575 aa16.17■□□□□ 0.18
PARP1-203ENST00000366794 GUCY1A2P33402 732 aa16.17■□□□□ 0.18
PARP1-203ENST00000366794 NOM1Q5C9Z4 860 aaKnown RBP16.17■□□□□ 0.18
PARP1-203ENST00000366794 MTERF4Q7Z6M4 381 aaKnown RBP16.17■□□□□ 0.18
PARP1-203ENST00000366794 TMTC2Q8N394 836 aa16.17■□□□□ 0.18
PARP1-203ENST00000366794 CELF1Q92879 486 aaKnown RBP16.17■□□□□ 0.18
PARP1-203ENST00000366794 SMARCC1Q92922 1105 aaPredicted RBP16.17■□□□□ 0.18
PARP1-203ENST00000366794 GPCPD1Q9NPB8 672 aa16.17■□□□□ 0.18
PARP1-203ENST00000366794 STIM1Q13586 685 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 PARP10Q53GL7 1025 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 DYNLL2Q96FJ2 89 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 TRIM47Q96LD4 638 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 DEXIO95424 95 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 JAKMIP3Q5VZ66 844 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 AP5Z1O43299 807 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 KIF5BP33176 963 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
PARP1-203ENST00000366794 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 GPR108Q9NPR9 543 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
PARP1-203ENST00000366794 PRDX5P30044 214 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 PUF60Q9UHX1 559 aaKnown RBP16.15■□□□□ 0.18
PARP1-203ENST00000366794 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 CAVIN2O95810 425 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 GNAT2P19087 354 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 TNNT3P45378 269 aaPredicted RBP16.15■□□□□ 0.18
PARP1-203ENST00000366794 MTIF2P46199 727 aaKnown RBP16.15■□□□□ 0.18
PARP1-203ENST00000366794 TNNI2P48788 182 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 KIAA1328Q86T90 577 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 SMIM22K7EJ46 135 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 CASQ1P31415 396 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 ELF2Q15723 593 aa16.15■□□□□ 0.18
PARP1-203ENST00000366794 TCP10Q12799 353 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 RIPOR2Q9Y4F9 1068 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 ZMYM6O95789 1325 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 SOS2Q07890 1332 aaPredicted RBP16.14■□□□□ 0.17
PARP1-203ENST00000366794 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
PARP1-203ENST00000366794 MED23Q9ULK4 1368 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 USP17L8P0C7I0 530 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.17
PARP1-203ENST00000366794 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 MYRIPQ8NFW9 859 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 HINFPQ9BQA5 517 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 CTNND2Q9UQB3 1225 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 YEATS4O95619 227 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 DLG5Q8TDM6 1919 aa16.14■□□□□ 0.17
PARP1-203ENST00000366794 SH2B2O14492 632 aaPredicted RBP16.13■□□□□ 0.17
PARP1-203ENST00000366794 NLRP12P59046 1061 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 FKBP15Q5T1M5 1219 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
PARP1-203ENST00000366794 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 TMEM87AQ8NBN3 555 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 FDPSP14324 419 aaKnown RBP16.13■□□□□ 0.17
PARP1-203ENST00000366794 ASIC1P78348 528 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 POSTNQ15063 836 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 ZNHIT6Q9NWK9 470 aaKnown RBP16.13■□□□□ 0.17
PARP1-203ENST00000366794 RTEL1Q9NZ71 1219 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 PPARDQ03181 441 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 EPSTI1Q96J88 318 aa16.13■□□□□ 0.17
PARP1-203ENST00000366794 USP27XA6NNY8 438 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 ANTXR2P58335 489 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 LRRC8AQ8IWT6 810 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 TCP11L1Q9NUJ3 509 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 TCEAL9Q9UHQ7 104 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 ZNF215Q9UL58 517 aaPredicted RBP16.12■□□□□ 0.17
PARP1-203ENST00000366794 ARID5AQ03989 594 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
PARP1-203ENST00000366794 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 ZSCAN12O43309 604 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 ZNF76P36508 570 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 SCNN1DP51172 638 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 CCDC150Q8NCX0 1101 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 USP21Q9UK80 565 aa16.12■□□□□ 0.17
PARP1-203ENST00000366794 NEMFO60524 1076 aa16.11■□□□□ 0.17
PARP1-203ENST00000366794 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
PARP1-203ENST00000366794 CSRNP2Q9H175 543 aa16.11■□□□□ 0.17
PARP1-203ENST00000366794 SLC39A14Q15043 492 aa16.11■□□□□ 0.17
PARP1-203ENST00000366794 CCDC43Q96MW1 224 aaKnown RBP16.11■□□□□ 0.17
PARP1-203ENST00000366794 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.11■□□□□ 0.17
PARP1-203ENST00000366794 MMRN2Q9H8L6 949 aa16.11■□□□□ 0.17
PARP1-203ENST00000366794 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
PARP1-203ENST00000366794 WDHD1O75717 1129 aaPredicted RBP16.11■□□□□ 0.17
PARP1-203ENST00000366794 TMCO3Q6UWJ1 677 aa16.11■□□□□ 0.17
PARP1-203ENST00000366794 ZSCAN10Q96SZ4 725 aaPredicted RBP16.11■□□□□ 0.17
PARP1-203ENST00000366794 CUTAO60888 179 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms