RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ANO1Q5XXA6 986 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 TDRD7Q8NHU6 1098 aaKnown RBP23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 WDR66Q8TBY9 1149 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 RBM17Q96I25 401 aaKnown RBP23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 DCP1AQ9NPI6 582 aaPredicted RBP23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 TAOK2Q9UL54 1235 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 BAZ2AQ9UIF9 1905 aaKnown RBP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 U2AF2P26368 475 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 PPP2R5BQ15173 497 aa23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 TRIM22Q8IYM9 498 aa23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 FANCBQ8NB91 859 aa23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 MRPS27Q92552 414 aaKnown RBP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 ZSCAN10Q96SZ4 725 aaPredicted RBP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 ADCY5O95622 1261 aa23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 MSNP26038 577 aaKnown RBP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 GPSM2P81274 684 aa23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 DZIP1Q86YF9 867 aaKnown RBP23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 ECM29Q5VYK3 1845 aa23.62■■□□□ 1.37
CHRNA3-202ENST00000348639 CCDC88AQ3V6T2 1871 aa23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 POLRMTO00411 1230 aaKnown RBP23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 KINO60870 393 aaKnown RBP23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 ZNF804AQ7Z570 1209 aa23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 NBPF11Q86T75 865 aa23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 CRACR2BQ8N4Y2 399 aaPredicted RBP23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 RGS17Q9UGC6 210 aaPredicted RBP23.61■■□□□ 1.37
CHRNA3-202ENST00000348639 GNL2Q13823 731 aaKnown RBP23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 ANO6Q4KMQ2 910 aa23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 ENAHQ8N8S7 591 aaPredicted RBP23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 ORC4O43929 436 aa23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 SBK1Q52WX2 424 aa23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 IQCA1Q86XH1 822 aa23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 FMR1NBQ8N0W7 255 aaPredicted RBP23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 NUP133Q8WUM0 1156 aa23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 ARPP21Q9UBL0 812 aaPredicted RBP23.6■■□□□ 1.37
CHRNA3-202ENST00000348639 UBE2Q2LH0YL09 131 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 UFL1O94874 794 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 CAVIN2O95810 425 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 LDHBP07195 334 aaKnown RBP23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 HMGB2P26583 209 aaKnown RBP23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 SLC39A14Q15043 492 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 DEXIO95424 95 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 APBA3O96018 575 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 ZKSCAN5Q9Y2L8 839 aa23.59■■□□□ 1.37
CHRNA3-202ENST00000348639 KIAA1551Q9HCM1 1747 aa23.58■■□□□ 1.37
CHRNA3-202ENST00000348639 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.37
CHRNA3-202ENST00000348639 GUCY1A2P33402 732 aa23.58■■□□□ 1.37
CHRNA3-202ENST00000348639 ZNF827Q17R98 1081 aa23.58■■□□□ 1.37
CHRNA3-202ENST00000348639 CBX8Q9HC52 389 aa23.58■■□□□ 1.37
CHRNA3-202ENST00000348639 MYH2Q9UKX2 1941 aa23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 PRDM1O75626 825 aa23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 SLC3A2P08195 630 aaKnown RBP23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 ATP2B4P23634 1241 aa23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 IFIT1BQ5T764 474 aaKnown RBP23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 BBOX1O75936 387 aa23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 MMP1P03956 469 aa23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 GGA1Q9UJY5 639 aa23.57■■□□□ 1.36
CHRNA3-202ENST00000348639 A0A1B0GVL5 298 aa23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 HOXA10P31260 410 aaPredicted RBP23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 NDUFA8P51970 172 aa23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 GSTO1P78417 241 aa23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 AXDND1Q5T1B0 1012 aaPredicted RBP23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 CATIPQ7Z7H3 387 aa23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 LUZP1Q86V48 1076 aa23.56■■□□□ 1.36
CHRNA3-202ENST00000348639 AP5Z1O43299 807 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 PPP6R2O75170 966 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 SAFBQ15424 915 aaKnown RBP eCLIP23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 MAP3K14Q99558 947 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 RNF26Q9BY78 433 aaPredicted RBP23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 LAMB1P07942 1786 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 CALM1P0DP23 149 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 CALM2P0DP24 149 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 CALM3P0DP25 149 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 CMA1P23946 247 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 ZNF165P49910 485 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 EVX2Q03828 476 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 PTPAQ15257 358 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 NOSTRINQ8IVI9 506 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 CMTR1Q8N1G2 835 aaKnown RBP23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
CHRNA3-202ENST00000348639 KLRG2A4D1S0 409 aaPredicted RBP23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 PLSCR1O15162 318 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 PLCB2Q00722 1185 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 PDE4BQ07343 736 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 CRAMP1Q96RY5 1269 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 DNAJC25Q9H1X3 360 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 RBM28Q9NW13 759 aaKnown RBP23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 MKRN1Q9UHC7 482 aaKnown RBP23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 DLEC1Q9Y238 1755 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 DDAH1O94760 285 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 STX1AQ16623 288 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 COL23A1Q86Y22 540 aaPredicted RBP23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 FOXP1Q9H334 677 aaPredicted RBP23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 CD209Q9NNX6 404 aa23.54■■□□□ 1.36
CHRNA3-202ENST00000348639 PODXL2Q9NZ53 605 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms