RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 POLR2AP24928 1970 aaKnown RBP21.36■■□□□ 1.01
SSSCA1-201ENST00000309328 FOCADQ5VW36 1801 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 USP17L21D6R901 530 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 NT5C2P49902 561 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 CTR9Q6PD62 1173 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 SAPCD2Q86UD0 394 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 ZNF112Q9UJU3 913 aa21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 ABT1Q9ULW3 272 aaKnown RBP21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 ANGEL1Q9UNK9 670 aaKnown RBP21.35■■□□□ 1.01
SSSCA1-201ENST00000309328 USP2O75604 605 aaPredicted RBP21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 HUNKP57058 714 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 MAP3K9P80192 1104 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 LDLRAD1Q5T700 205 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 DLK2Q6UY11 383 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 CDAN1Q8IWY9 1227 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 ESYT1Q9BSJ8 1104 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 EPB41L4AQ9HCS5 686 aaPredicted RBP21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 CSADQ9Y600 493 aa21.34■■□□□ 1.01
SSSCA1-201ENST00000309328 TRPM7Q96QT4 1865 aa21.33■■□□□ 1.01
SSSCA1-201ENST00000309328 CTNND1O60716 968 aaKnown RBP21.33■■□□□ 1.01
SSSCA1-201ENST00000309328 PCP11498 1178 aaKnown RBP21.33■■□□□ 1.01
SSSCA1-201ENST00000309328 MIGA2Q7L4E1 593 aa21.33■■□□□ 1.01
SSSCA1-201ENST00000309328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.33■■□□□ 1.01
SSSCA1-201ENST00000309328 WRNIP1Q96S55 665 aa21.33■■□□□ 1.01
SSSCA1-201ENST00000309328 ROBO3Q96MS0 1386 aa21.33■■□□□ 1
SSSCA1-201ENST00000309328 GABPAQ06546 454 aa21.32■■□□□ 1
SSSCA1-201ENST00000309328 NOL9Q5SY16 702 aaKnown RBP21.32■■□□□ 1
SSSCA1-201ENST00000309328 RASSF10A6NK89 507 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 EPB41L2O43491 1005 aaKnown RBP21.31■■□□□ 1
SSSCA1-201ENST00000309328 FGAP02671 866 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 PLCD1P51178 756 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 PDE4BQ07343 736 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 VPS53Q5VIR6 699 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 C16orf86Q6ZW13 317 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 CCDC102AQ96A19 550 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 TBC1D2Q9BYX2 928 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 ANAPC4Q9UJX5 808 aa21.31■■□□□ 1
SSSCA1-201ENST00000309328 DDX60LQ5H9U9 1706 aaKnown RBP21.31■■□□□ 1
SSSCA1-201ENST00000309328 NAV1Q8NEY1 1877 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 PHF20L1A8MW92 1017 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 MINDY4BA8MYZ0 360 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 FOXP2O15409 715 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 REC8O95072 547 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 ECE1P42892 770 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 PPARAQ07869 468 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 PRKG1Q13976 671 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 CCDC17Q96LX7 622 aa21.3■■□□□ 1
SSSCA1-201ENST00000309328 U3KPZ7 1027 aaPredicted RBP21.3■■□□□ 1
SSSCA1-201ENST00000309328 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
SSSCA1-201ENST00000309328 IMMTQ16891 758 aaKnown RBP21.29■■□□□ 1
SSSCA1-201ENST00000309328 RGMBQ6NW40 437 aa21.29■■□□□ 1
SSSCA1-201ENST00000309328 SLC10A4Q96EP9 437 aa21.29■■□□□ 1
SSSCA1-201ENST00000309328 RNF41Q9H4P4 317 aaPredicted RBP21.29■■□□□ 1
SSSCA1-201ENST00000309328 PICK1Q9NRD5 415 aa21.29■■□□□ 1
SSSCA1-201ENST00000309328 UBE2Q2LH0YL09 131 aa21.28■■□□□ 1
SSSCA1-201ENST00000309328 ASNSP08243 561 aa21.28■■□□□ 1
SSSCA1-201ENST00000309328 DEFB115Q30KQ5 88 aa21.28■■□□□ 1
SSSCA1-201ENST00000309328 SCYL3Q8IZE3 742 aa21.28■■□□□ 1
SSSCA1-201ENST00000309328 MAP4K1Q92918 833 aa21.28■■□□□ 1
SSSCA1-201ENST00000309328 ZNF213O14771 459 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 CAP2P40123 477 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 VGLL4Q14135 290 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 CERKLQ49MI3 558 aaPredicted RBP21.27■■□□□ 1
SSSCA1-201ENST00000309328 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.27■■□□□ 1
SSSCA1-201ENST00000309328 DNAJC18Q9H819 358 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 MKNK2Q9HBH9 465 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 CABP5Q9NP86 173 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 ANO2Q9NQ90 1003 aa21.27■■□□□ 1
SSSCA1-201ENST00000309328 MYH1P12882 1939 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 ZBTB48P10074 688 aaPredicted RBP21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 CYP2D6P10635 497 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 SHMT1P34896 483 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 CDK8P49336 464 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 ZNF157P51786 506 aaPredicted RBP21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 SLC4A8Q2Y0W8 1093 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 ERO1BQ86YB8 467 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 IL25Q9H293 177 aa21.26■□□□□ 0.99
SSSCA1-201ENST00000309328 INPP5BP32019 993 aa21.25■□□□□ 0.99
SSSCA1-201ENST00000309328 PPP4R3BQ5MIZ7 849 aa21.25■□□□□ 0.99
SSSCA1-201ENST00000309328 RNF20Q5VTR2 975 aa21.25■□□□□ 0.99
SSSCA1-201ENST00000309328 MOB2Q70IA6 237 aa21.25■□□□□ 0.99
SSSCA1-201ENST00000309328 REM2Q8IYK8 340 aaPredicted RBP21.25■□□□□ 0.99
SSSCA1-201ENST00000309328 CYP2D7A0A087X1C5 515 aa21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 SPDYE5A6NIY4 337 aa21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 PPATQ06203 517 aa21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 ZKSCAN4Q969J2 545 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 LSG1Q9H089 658 aaKnown RBP21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 AS3MTQ9HBK9 375 aa21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 SNCAIPQ9Y6H5 919 aa21.24■□□□□ 0.99
SSSCA1-201ENST00000309328 FAM196BA6NMK8 535 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 ORC4O43929 436 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 SLC10A3P09131 477 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 FGRP09769 529 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 NOGQ13253 232 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 ABCB5Q2M3G0 1257 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 AKNAD1Q5T1N1 836 aa21.23■□□□□ 0.99
SSSCA1-201ENST00000309328 MFSD6Q6ZSS7 791 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms