RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 ROBO3Q96MS0 1386 aa21.43■■□□□ 1.02
TMED3-201ENST00000299705 SIPA1L1O43166 1804 aa21.42■■□□□ 1.02
TMED3-201ENST00000299705 ZNF213O14771 459 aa21.42■■□□□ 1.02
TMED3-201ENST00000299705 SEC24BO95487 1268 aa21.42■■□□□ 1.02
TMED3-201ENST00000299705 GABPAQ06546 454 aa21.42■■□□□ 1.02
TMED3-201ENST00000299705 SLC4A8Q2Y0W8 1093 aa21.42■■□□□ 1.02
TMED3-201ENST00000299705 BACH2Q9BYV9 841 aa21.42■■□□□ 1.02
TMED3-201ENST00000299705 SLC3A2P08195 630 aaKnown RBP21.41■■□□□ 1.02
TMED3-201ENST00000299705 NF2P35240 595 aa21.41■■□□□ 1.02
TMED3-201ENST00000299705 FSTL1Q12841 308 aa21.41■■□□□ 1.02
TMED3-201ENST00000299705 DCAF15Q66K64 600 aa21.41■■□□□ 1.02
TMED3-201ENST00000299705 DLK2Q6UY11 383 aa21.41■■□□□ 1.02
TMED3-201ENST00000299705 LAMA4Q16363 1823 aa21.41■■□□□ 1.02
TMED3-201ENST00000299705 TRAF5O00463 557 aa21.4■■□□□ 1.02
TMED3-201ENST00000299705 EVX2Q03828 476 aa21.4■■□□□ 1.02
TMED3-201ENST00000299705 C16orf86Q6ZW13 317 aa21.4■■□□□ 1.02
TMED3-201ENST00000299705 CRACR2BQ8N4Y2 399 aaPredicted RBP21.4■■□□□ 1.02
TMED3-201ENST00000299705 SWAP70Q9UH65 585 aa21.4■■□□□ 1.02
TMED3-201ENST00000299705 SSC5DA1L4H1 1573 aa21.4■■□□□ 1.02
TMED3-201ENST00000299705 CYP21A2P08686 494 aa21.39■■□□□ 1.02
TMED3-201ENST00000299705 RNF20Q5VTR2 975 aa21.39■■□□□ 1.02
TMED3-201ENST00000299705 SMIM22K7EJ46 135 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 PCP11498 1178 aaKnown RBP21.39■■□□□ 1.01
TMED3-201ENST00000299705 HSPA4P34932 840 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 HAND2P61296 217 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 CREB3L3Q68CJ9 461 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 MIGA2Q7L4E1 593 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 DYNLL2Q96FJ2 89 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 TRIM34Q9BYJ4 488 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 DNAJC18Q9H819 358 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.39■■□□□ 1.01
TMED3-201ENST00000299705 ZNF287Q9HBT7 754 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 PASKQ96RG2 1323 aa21.39■■□□□ 1.01
TMED3-201ENST00000299705 SLC27A2O14975 620 aa21.38■■□□□ 1.01
TMED3-201ENST00000299705 PPP1R12BO60237 982 aaPredicted RBP21.38■■□□□ 1.01
TMED3-201ENST00000299705 FGRP09769 529 aa21.38■■□□□ 1.01
TMED3-201ENST00000299705 CTDSPL2Q05D32 466 aa21.38■■□□□ 1.01
TMED3-201ENST00000299705 PDE4BQ07343 736 aa21.38■■□□□ 1.01
TMED3-201ENST00000299705 KCNB2Q92953 911 aa21.38■■□□□ 1.01
TMED3-201ENST00000299705 NBPF3Q9H094 633 aa21.38■■□□□ 1.01
TMED3-201ENST00000299705 RNF41Q9H4P4 317 aaPredicted RBP21.38■■□□□ 1.01
TMED3-201ENST00000299705 CDK8P49336 464 aa21.37■■□□□ 1.01
TMED3-201ENST00000299705 AKNAD1Q5T1N1 836 aa21.37■■□□□ 1.01
TMED3-201ENST00000299705 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
TMED3-201ENST00000299705 STAG1Q8WVM7 1258 aa21.37■■□□□ 1.01
TMED3-201ENST00000299705 ZNF341Q9BYN7 854 aa21.37■■□□□ 1.01
TMED3-201ENST00000299705 MCCP23508 829 aa21.36■■□□□ 1.01
TMED3-201ENST00000299705 SHMT1P34896 483 aa21.36■■□□□ 1.01
TMED3-201ENST00000299705 C1QTNF8P60827 252 aa21.36■■□□□ 1.01
TMED3-201ENST00000299705 FMR1Q06787 632 aaKnown RBP eCLIP21.36■■□□□ 1.01
TMED3-201ENST00000299705 TSGA10IPQ3SY00 556 aa21.36■■□□□ 1.01
TMED3-201ENST00000299705 TBC1D10CQ8IV04 446 aa21.36■■□□□ 1.01
TMED3-201ENST00000299705 ZNF112Q9UJU3 913 aa21.36■■□□□ 1.01
TMED3-201ENST00000299705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.36■■□□□ 1.01
TMED3-201ENST00000299705 TRPM7Q96QT4 1865 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 PHF20L1A8MW92 1017 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 USP2O75604 605 aaPredicted RBP21.35■■□□□ 1.01
TMED3-201ENST00000299705 SLURP2P0DP57 97 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 NT5C2P49902 561 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 FKBP1BP68106 108 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 MAP3K11Q16584 847 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 MFSD6Q6ZSS7 791 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 SLC44A5Q8NCS7 719 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 KLRG1Q96E93 195 aa21.35■■□□□ 1.01
TMED3-201ENST00000299705 FAM196BA6NMK8 535 aa21.34■■□□□ 1.01
TMED3-201ENST00000299705 ORC4O43929 436 aa21.34■■□□□ 1.01
TMED3-201ENST00000299705 CELF2O95319 508 aaKnown RBP21.34■■□□□ 1.01
TMED3-201ENST00000299705 ZKSCAN1P17029 563 aaPredicted RBP21.34■■□□□ 1.01
TMED3-201ENST00000299705 UPF2Q9HAU5 1272 aaKnown RBP21.34■■□□□ 1.01
TMED3-201ENST00000299705 MKNK2Q9HBH9 465 aa21.34■■□□□ 1.01
TMED3-201ENST00000299705 PAPPA2Q9BXP8 1791 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 IREB2P48200 963 aaKnown RBP21.33■■□□□ 1.01
TMED3-201ENST00000299705 CST9Q5W186 159 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 ARMC9Q7Z3E5 817 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 STK11IPQ8N1F8 1099 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 C2orf69Q8N8R5 385 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 CCDC17Q96LX7 622 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 CNNM2Q9H8M5 875 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 ZNF408Q9H9D4 720 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 GBA2Q9HCG7 927 aaPredicted RBP21.33■■□□□ 1.01
TMED3-201ENST00000299705 TACC3Q9Y6A5 838 aa21.33■■□□□ 1.01
TMED3-201ENST00000299705 UNCXA6NJT0 531 aa21.32■■□□□ 1
TMED3-201ENST00000299705 E7EWF7 191 aa21.32■■□□□ 1
TMED3-201ENST00000299705 RASA1P20936 1047 aa21.32■■□□□ 1
TMED3-201ENST00000299705 CERKLQ49MI3 558 aaPredicted RBP21.32■■□□□ 1
TMED3-201ENST00000299705 RASEFQ8IZ41 740 aa21.32■■□□□ 1
TMED3-201ENST00000299705 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
TMED3-201ENST00000299705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.32■■□□□ 17e-11■■■■■ 36.1
TMED3-201ENST00000299705 TAF6LQ9Y6J9 622 aa21.32■■□□□ 1
TMED3-201ENST00000299705 CTNND1O60716 968 aaKnown RBP21.32■■□□□ 1
TMED3-201ENST00000299705 CAP2P40123 477 aa21.32■■□□□ 1
TMED3-201ENST00000299705 PRKG1Q13976 671 aa21.32■■□□□ 1
TMED3-201ENST00000299705 KRT32Q14532 448 aa21.32■■□□□ 1
TMED3-201ENST00000299705 WRNIP1Q96S55 665 aa21.32■■□□□ 1
TMED3-201ENST00000299705 KRT23Q9C075 422 aa21.32■■□□□ 1
TMED3-201ENST00000299705 INCENPQ9NQS7 918 aa21.32■■□□□ 1
TMED3-201ENST00000299705 GINM1Q9NU53 330 aa21.32■■□□□ 1
TMED3-201ENST00000299705 ANGEL1Q9UNK9 670 aaKnown RBP21.32■■□□□ 1
TMED3-201ENST00000299705 MYH8P13535 1937 aa21.31■■□□□ 1
TMED3-201ENST00000299705 PRDM1O75626 825 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms