RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 IMMTQ16891 758 aaKnown RBP33■■■□□ 2.87
CHCHD4-201ENST00000295767 ZNF213O14771 459 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 CYP21A2P08686 494 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 DYNLL2Q96FJ2 89 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 NBPF3Q9H094 633 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 EHD4Q9H223 541 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 SERPINB13Q9UIV8 391 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 ANAPC4Q9UJX5 808 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 FMR1Q06787 632 aaKnown RBP eCLIP32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 STK11IPQ8N1F8 1099 aa32.99■■■□□ 2.87
CHCHD4-201ENST00000295767 FAM196BA6NMK8 535 aa32.98■■■□□ 2.87
CHCHD4-201ENST00000295767 TOMM70O94826 608 aa32.98■■■□□ 2.87
CHCHD4-201ENST00000295767 ITGBL1O95965 494 aaPredicted RBP32.98■■■□□ 2.87
CHCHD4-201ENST00000295767 GABPAQ06546 454 aa32.98■■■□□ 2.87
CHCHD4-201ENST00000295767 CREB3L3Q68CJ9 461 aa32.98■■■□□ 2.87
CHCHD4-201ENST00000295767 DNAJC18Q9H819 358 aa32.98■■■□□ 2.87
CHCHD4-201ENST00000295767 SLC27A2O14975 620 aa32.97■■■□□ 2.87
CHCHD4-201ENST00000295767 SUPT20HL1Q3ZLR7 823 aa32.97■■■□□ 2.87
CHCHD4-201ENST00000295767 METTL16Q86W50 562 aaKnown RBP32.97■■■□□ 2.87
CHCHD4-201ENST00000295767 FOXP4Q8IVH2 680 aaPredicted RBP32.97■■■□□ 2.87
CHCHD4-201ENST00000295767 CRACR2BQ8N4Y2 399 aaPredicted RBP32.97■■■□□ 2.87
CHCHD4-201ENST00000295767 MIGA2Q7L4E1 593 aa32.96■■■□□ 2.87
CHCHD4-201ENST00000295767 TBC1D10CQ8IV04 446 aa32.96■■■□□ 2.87
CHCHD4-201ENST00000295767 SMC1BQ8NDV3 1235 aa32.96■■■□□ 2.87
CHCHD4-201ENST00000295767 RBM46Q8TBY0 533 aaKnown RBP32.96■■■□□ 2.87
CHCHD4-201ENST00000295767 TAF6LQ9Y6J9 622 aa32.96■■■□□ 2.87
CHCHD4-201ENST00000295767 HSPA4P34932 840 aa32.95■■■□□ 2.87
CHCHD4-201ENST00000295767 C16orf86Q6ZW13 317 aa32.95■■■□□ 2.87
CHCHD4-201ENST00000295767 SLC44A5Q8NCS7 719 aa32.95■■■□□ 2.87
CHCHD4-201ENST00000295767 HOOK2Q96ED9 719 aa32.95■■■□□ 2.87
CHCHD4-201ENST00000295767 HERC5Q9UII4 1024 aaKnown RBP32.95■■■□□ 2.87
CHCHD4-201ENST00000295767 TACC3Q9Y6A5 838 aa32.95■■■□□ 2.87
CHCHD4-201ENST00000295767 TBC1D12O60347 775 aa32.94■■■□□ 2.86
CHCHD4-201ENST00000295767 MAP3K10Q02779 954 aa32.94■■■□□ 2.86
CHCHD4-201ENST00000295767 TRIM34Q9BYJ4 488 aa32.94■■■□□ 2.86
CHCHD4-201ENST00000295767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.94■■■□□ 2.86
CHCHD4-201ENST00000295767 OTOFQ9HC10 1997 aa32.93■■■□□ 2.86
CHCHD4-201ENST00000295767 ATAD5Q96QE3 1844 aa32.93■■■□□ 2.86
CHCHD4-201ENST00000295767 PAPPA2Q9BXP8 1791 aa32.93■■■□□ 2.86
CHCHD4-201ENST00000295767 SLC3A2P08195 630 aaKnown RBP32.93■■■□□ 2.86
CHCHD4-201ENST00000295767 RNF20Q5VTR2 975 aa32.93■■■□□ 2.86
CHCHD4-201ENST00000295767 FZD1Q9UP38 647 aa32.93■■■□□ 2.86
CHCHD4-201ENST00000295767 NF2P35240 595 aa32.92■■■□□ 2.86
CHCHD4-201ENST00000295767 CDK8P49336 464 aa32.92■■■□□ 2.86
CHCHD4-201ENST00000295767 DCAF15Q66K64 600 aa32.92■■■□□ 2.86
CHCHD4-201ENST00000295767 INCENPQ9NQS7 918 aa32.92■■■□□ 2.86
CHCHD4-201ENST00000295767 AKNAD1Q5T1N1 836 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 RASEFQ8IZ41 740 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 ZNF408Q9H9D4 720 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 SWAP70Q9UH65 585 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 MCCP23508 829 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 SHMT1P34896 483 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 STAG1Q8WVM7 1258 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 KCNB2Q92953 911 aa32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.91■■■□□ 2.86
CHCHD4-201ENST00000295767 PDE4BQ07343 736 aa32.9■■■□□ 2.86
CHCHD4-201ENST00000295767 PRKG1Q13976 671 aa32.9■■■□□ 2.86
CHCHD4-201ENST00000295767 TAOK2Q9UL54 1235 aa32.9■■■□□ 2.86
CHCHD4-201ENST00000295767 PRDM1O75626 825 aa32.89■■■□□ 2.86
CHCHD4-201ENST00000295767 STOX1Q6ZVD7 989 aa32.89■■■□□ 2.86
CHCHD4-201ENST00000295767 NEDD4P46934 1319 aa32.89■■■□□ 2.86
CHCHD4-201ENST00000295767 FGRP09769 529 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 MFSD6Q6ZSS7 791 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 ZNF341Q9BYN7 854 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 RNF41Q9H4P4 317 aaPredicted RBP32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 UPF2Q9HAU5 1272 aaKnown RBP32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 PASKQ96RG2 1323 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 DOCK1Q14185 1865 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 E7EWF7 191 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 ZKSCAN1P17029 563 aaPredicted RBP32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 TATDN1Q6P1N9 297 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 MKNK2Q9HBH9 465 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 SNX14Q9Y5W7 946 aa32.88■■■□□ 2.85
CHCHD4-201ENST00000295767 PHF20L1A8MW92 1017 aa32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 PPP1R12BO60237 982 aaPredicted RBP32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 USP2O75604 605 aaPredicted RBP32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 CELF2O95319 508 aaKnown RBP32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 PCP11498 1178 aaKnown RBP32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 RASA1P20936 1047 aa32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 RRP1BQ14684 758 aaKnown RBP32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 ZNF287Q9HBT7 754 aa32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 TOMM22Q9NS69 142 aa32.86■■■□□ 2.85
CHCHD4-201ENST00000295767 GREB1LQ9C091 1923 aaPredicted RBP32.85■■■□□ 2.85
CHCHD4-201ENST00000295767 ORC4O43929 436 aa32.85■■■□□ 2.85
CHCHD4-201ENST00000295767 FSTL1Q12841 308 aa32.85■■■□□ 2.85
CHCHD4-201ENST00000295767 TSGA10IPQ3SY00 556 aa32.85■■■□□ 2.85
CHCHD4-201ENST00000295767 C22orf23Q9BZE7 217 aa32.85■■■□□ 2.85
CHCHD4-201ENST00000295767 RRP12Q5JTH9 1297 aaKnown RBP32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 MOB2Q70IA6 237 aa32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 NKX2-3Q8TAU0 364 aa32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 KLRG1Q96E93 195 aa32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 ZNF112Q9UJU3 913 aa32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 ANGEL1Q9UNK9 670 aaKnown RBP32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 TTLL12Q14166 644 aaPredicted RBP32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 CERKLQ49MI3 558 aaPredicted RBP32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 CST9Q5W186 159 aa32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 WRNIP1Q96S55 665 aa32.84■■■□□ 2.85
CHCHD4-201ENST00000295767 ADCK5Q3MIX3 580 aa32.83■■■□□ 2.85
CHCHD4-201ENST00000295767 INPP5BP32019 993 aa32.82■■■□□ 2.84
CHCHD4-201ENST00000295767 ZNF444Q8N0Y2 327 aaPredicted RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms