RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 C17orf99Q6UX52 265 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 FAM151AQ8WW52 585 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 ZNF341Q9BYN7 854 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 FAM198AQ9UFP1 575 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 PA2G4Q9UQ80 394 aaKnown RBP11.61□□□□□ -0.55
CNOT9-202ENST00000295701 SUGT1Q9Y2Z0 365 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 E9PSI1 815 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 PHKA1P46020 1223 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 MOGSQ13724 837 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 MTFR1Q15390 333 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 DCAF15Q66K64 600 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 LPIN2Q92539 896 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 EPAS1Q99814 870 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 ZNF112Q9UJU3 913 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 MAST3O60307 1309 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
CNOT9-202ENST00000295701 MGAMO43451 1857 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 PPP1R3GB7ZBB8 358 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
CNOT9-202ENST00000295701 PDHXO00330 501 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 ADORA1P30542 326 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 ZEB1P37275 1124 aaPredicted RBP11.59□□□□□ -0.55
CNOT9-202ENST00000295701 PPATQ06203 517 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 ARHGEF6Q15052 776 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 E2F4Q16254 413 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 ATP2B3Q16720 1220 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 USP40Q9NVE5 1235 aa11.59□□□□□ -0.55
CNOT9-202ENST00000295701 RPAP1Q9BWH6 1393 aaPredicted RBP11.58□□□□□ -0.56
CNOT9-202ENST00000295701 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
CNOT9-202ENST00000295701 OSBPP22059 807 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 PSMC4P43686 418 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 KIF22Q14807 665 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 ZCCHC17Q9NP64 241 aaKnown RBP11.58□□□□□ -0.56
CNOT9-202ENST00000295701 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
CNOT9-202ENST00000295701 KCNH4Q9UQ05 1017 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 ADGRA2Q96PE1 1338 aa11.58□□□□□ -0.56
CNOT9-202ENST00000295701 PTPRFP10586 1907 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 WDHD1O75717 1129 aaPredicted RBP11.57□□□□□ -0.56
CNOT9-202ENST00000295701 UBTFL1P0CB47 393 aaPredicted RBP11.57□□□□□ -0.56
CNOT9-202ENST00000295701 TIMM10P62072 90 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 ANKRD23Q86SG2 305 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 DDX12PQ92771 950 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 SHISA4Q96DD7 197 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.57□□□□□ -0.56
CNOT9-202ENST00000295701 LRRFIP2Q9Y608 721 aaKnown RBP11.57□□□□□ -0.56
CNOT9-202ENST00000295701 TRIOBPQ9H2D6 2365 aa11.57□□□□□ -0.56
CNOT9-202ENST00000295701 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 PHF20L1A8MW92 1017 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 H0YGN5 161 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
CNOT9-202ENST00000295701 CYP2C8P10632 490 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 COL9A1P20849 921 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 RGS3P49796 1198 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 FXR1P51114 621 aaKnown RBP eCLIP11.56□□□□□ -0.56
CNOT9-202ENST00000295701 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 NOL9Q5SY16 702 aaKnown RBP11.56□□□□□ -0.56
CNOT9-202ENST00000295701 CCDC84Q86UT8 332 aaPredicted RBP11.56□□□□□ -0.56
CNOT9-202ENST00000295701 DDX4Q9NQI0 724 aaKnown RBP11.56□□□□□ -0.56
CNOT9-202ENST00000295701 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 GABRQQ9UN88 632 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
CNOT9-202ENST00000295701 PHIPQ8WWQ0 1821 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
CNOT9-202ENST00000295701 ATRNL1Q5VV63 1379 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
CNOT9-202ENST00000295701 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
CNOT9-202ENST00000295701 CIAO1O76071 339 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 CCDC102BQ68D86 513 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
CNOT9-202ENST00000295701 MEIS3Q99687 375 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
CNOT9-202ENST00000295701 DENND2AQ9ULE3 1009 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 ZHX2Q9Y6X8 837 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
CNOT9-202ENST00000295701 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 BCRP11274 1271 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 GRK4P32298 578 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
CNOT9-202ENST00000295701 PRMT2P55345 433 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 RASGRF1Q13972 1273 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 GADL1Q6ZQY3 521 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 ZSCAN29Q8IWY8 852 aaPredicted RBP11.54□□□□□ -0.56
CNOT9-202ENST00000295701 RAET1EQ8TD07 263 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 ZNF384Q8TF68 577 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 ABCF2Q9UG63 623 aa11.54□□□□□ -0.56
CNOT9-202ENST00000295701 MYPNQ86TC9 1320 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms