RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 DENND2AQ9ULE3 1009 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SPEF2Q9C093 1822 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PSDA5PKW4 1024 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PLSCR1O15162 318 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CTDNEP1O95476 244 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 GUCY1B3Q02153 619 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CCDC102BQ68D86 513 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ENGASEQ8NFI3 743 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ARGLU1Q9NWB6 273 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 GYG1P46976 350 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 FSIP1Q8NA03 581 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 APPBP2Q92624 585 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 NAT10Q9H0A0 1025 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
MAP1LC3B-201ENST00000268607 FAM160A1Q05DH4 1040 aa18.33■□□□□ 0.53
MAP1LC3B-201ENST00000268607 OLFM4Q6UX06 510 aa18.33■□□□□ 0.53
MAP1LC3B-201ENST00000268607 EPC1Q9H2F5 836 aa18.33■□□□□ 0.53
MAP1LC3B-201ENST00000268607 BCORQ6W2J9 1755 aa18.33■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PFKFB2O60825 505 aa18.33■□□□□ 0.52
MAP1LC3B-201ENST00000268607 APPP05067 770 aa18.33■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ME1P48163 572 aa18.33■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.52
MAP1LC3B-201ENST00000268607 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3B-201ENST00000268607 TM4SF1P30408 202 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ICE2Q659A1 982 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 MNS1Q8NEH6 495 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 GPS2Q13227 327 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 IMMTQ16891 758 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 DPCR1Q3MIW9 517 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 AKT1S1Q96B36 256 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
MAP1LC3B-201ENST00000268607 OAS2P29728 719 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 RPS8P62241 208 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ETF1P62495 437 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SDF4Q9BRK5 362 aa18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 URI1O94763 535 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SF3B3Q15393 1217 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-201ENST00000268607 FANCGO15287 622 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SASH3O75995 380 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PUM3Q15397 648 aaKnown RBP18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 TXNRD3Q86VQ6 643 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CARD6Q9BX69 1037 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ZNF532Q9HCE3 1301 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ADD2P35612 726 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SRLQ86TD4 932 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ZNF831Q5JPB2 1677 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PNPLA7Q6ZV29 1317 aa18.3■□□□□ 0.52
MAP1LC3B-201ENST00000268607 A0A1B0GVL5 298 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 MMP10P09238 476 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CCDC34Q96HJ3 373 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 INCENPQ9NQS7 918 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 RRP15Q9Y3B9 282 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ZNF213O14771 459 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
MAP1LC3B-201ENST00000268607 BIN1O00499 593 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PRC1O43663 620 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 TADA3O75528 432 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 LPIN2Q92539 896 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 UBXN6Q9BZV1 441 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CWC15Q9P013 229 aaKnown RBP18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 MROH5Q6ZUA9 1318 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 NRDCO43847 1150 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 TBC1D8O95759 1140 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ADRA2BP18089 450 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 FGFR2P21802 821 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 RASGRF1Q13972 1273 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PHLPP2Q6ZVD8 1323 aa18.28■□□□□ 0.52
MAP1LC3B-201ENST00000268607 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 ZRSR1Q15695 479 aaKnown RBP18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 FMR1NBQ8N0W7 255 aaPredicted RBP18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PCDHA7Q9UN72 937 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 PDE6AP16499 860 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 KCNJ6P48051 423 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 EVCP57679 992 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms