RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.28
CCDC54-201ENST00000261058 MSTNO14793 375 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 HTR3BO95264 441 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 NEFMP07197 916 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 CLCQ05315 142 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 PPM1JQ5JR12 505 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 DRC1Q96MC2 740 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 TANGO6Q9C0B7 1094 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 FAM105AQ9NUU6 356 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 AP4E1Q9UPM8 1137 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 CORINQ9Y5Q5 1042 aa7.08□□□□□ -1.28
CCDC54-201ENST00000261058 MEIS3P2A8K0S8 358 aa7.07□□□□□ -1.28
CCDC54-201ENST00000261058 EZH1Q92800 747 aaPredicted RBP7.07□□□□□ -1.28
CCDC54-201ENST00000261058 SHDQ96IW2 340 aa7.07□□□□□ -1.28
CCDC54-201ENST00000261058 ACSS3Q9H6R3 686 aa7.07□□□□□ -1.28
CCDC54-201ENST00000261058 PCDHB14Q9Y5E9 798 aa7.07□□□□□ -1.28
CCDC54-201ENST00000261058 CSADQ9Y600 493 aa7.07□□□□□ -1.28
CCDC54-201ENST00000261058 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.06□□□□□ -1.28
CCDC54-201ENST00000261058 C1QTNF9BB2RNN3 333 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 GRIN3BO60391 1043 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 ITGB2P05107 769 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 IMPDH2P12268 514 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 GLB1P16278 677 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 GRK4P32298 578 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 CAP2P40123 477 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 PDE4BQ07343 736 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 TTLL4Q14679 1199 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 PLA2G4EQ3MJ16 856 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 ARMC10Q8N2F6 343 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 MYRFLQ96LU7 910 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.28
CCDC54-201ENST00000261058 PPT2Q9UMR5 302 aa7.06□□□□□ -1.28
CCDC54-201ENST00000261058 PRAMEF27A3QJZ7 478 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 ASPAP45381 313 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 GIPRP48546 466 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 GK5Q6ZS86 529 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 DYMQ7RTS9 669 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 ISL2Q96A47 359 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 SRRTQ9BXP5 876 aaKnown RBP7.05□□□□□ -1.28
CCDC54-201ENST00000261058 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
CCDC54-201ENST00000261058 DNAJA2O60884 412 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 IGSF3O75054 1194 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 ATP2B1P20020 1258 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 MCM4P33991 863 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 RBL2Q08999 1139 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 MRPL41Q8IXM3 137 aaKnown RBP7.04□□□□□ -1.28
CCDC54-201ENST00000261058 UBXN4Q92575 508 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 ACSF2Q96CM8 615 aaPredicted RBP7.04□□□□□ -1.28
CCDC54-201ENST00000261058 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
CCDC54-201ENST00000261058 HCLS1P14317 486 aaPredicted RBP7.03□□□□□ -1.28
CCDC54-201ENST00000261058 PLCG1P19174 1290 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 SLBPQ14493 270 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC54-201ENST00000261058 CDPF1Q6NVV7 123 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 SEZ6L2Q6UXD5 910 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 UBE3DQ7Z6J8 389 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 MCATQ8IVS2 390 aaKnown RBP7.03□□□□□ -1.28
CCDC54-201ENST00000261058 SMYD4Q8IYR2 804 aaPredicted RBP7.03□□□□□ -1.28
CCDC54-201ENST00000261058 KCT2Q8NC54 265 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 SEMA6CQ9H3T2 930 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 GMIPQ9P107 970 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 TJP2Q9UDY2 1190 aa7.03□□□□□ -1.28
CCDC54-201ENST00000261058 SART1O43290 800 aaKnown RBP7.02□□□□□ -1.29
CCDC54-201ENST00000261058 PGRP06401 933 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 ETF1P62495 437 aaKnown RBP7.02□□□□□ -1.29
CCDC54-201ENST00000261058 LRRFIP1Q32MZ4 808 aaKnown RBP7.02□□□□□ -1.29
CCDC54-201ENST00000261058 CDCP2Q5VXM1 449 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 CCDC81Q6ZN84 652 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 LSRQ86X29 649 aaPredicted RBP7.02□□□□□ -1.29
CCDC54-201ENST00000261058 HID1Q8IV36 788 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 FAM20CQ8IXL6 584 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 SLFN12Q8IYM2 578 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 TAB3Q8N5C8 712 aaPredicted RBP7.02□□□□□ -1.29
CCDC54-201ENST00000261058 OR6P1Q8NGX9 317 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 TMEM40Q8WWA1 233 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 PSMG3-AS1Q96PY0 264 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 FERD3LQ96RJ6 166 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 ZNF408Q9H9D4 720 aa7.02□□□□□ -1.29
CCDC54-201ENST00000261058 SLC22A31A6NKX4 558 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 EIF6P56537 245 aaKnown RBP7.01□□□□□ -1.29
CCDC54-201ENST00000261058 NKG7Q16617 165 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 SGO2Q562F6 1265 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 ANTXR1Q9H6X2 564 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 PIDD1Q9HB75 910 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 GAS2O43903 313 aaKnown RBP7.01□□□□□ -1.29
CCDC54-201ENST00000261058 ADAM23O75077 832 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 SSBP05455 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCDC54-201ENST00000261058 ETFBP38117 255 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 OVOS1Q6IE37 1185 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 FAM169BQ8N8A8 192 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 C19orf47Q8N9M1 422 aaKnown RBP7.01□□□□□ -1.29
CCDC54-201ENST00000261058 UTP4Q969X6 686 aaKnown RBP7.01□□□□□ -1.29
CCDC54-201ENST00000261058 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 CNNM2Q9H8M5 875 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 PCOLCE2Q9UKZ9 415 aa7.01□□□□□ -1.29
CCDC54-201ENST00000261058 TNFRSF10CO14798 259 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms