RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 PRPSAP1Q14558 356 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 HS1BP3Q53T59 392 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 BSPRYQ5W0U4 402 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 TTC1Q99614 292 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 ARHGEF35A5YM69 484 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 POLR2BP30876 1174 aaKnown RBP8.35□□□□□ -1.07
PRDM2-201ENST00000235372 FAM47CQ5HY64 1035 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 TCHHQ07283 1943 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 TRAF5O00463 557 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 CHMP2AO43633 222 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
PRDM2-201ENST00000235372 BCRP11274 1271 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 MYCLP12524 364 aaPredicted RBP8.35□□□□□ -1.07
PRDM2-201ENST00000235372 KRT15P19012 456 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 RABEP2Q9H5N1 569 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 A6NNZ2 444 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 RHOXF2BP0C7M4 288 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 ATF7P17544 494 aaPredicted RBP8.35□□□□□ -1.07
PRDM2-201ENST00000235372 TUBB8Q3ZCM7 444 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 CNNM4Q6P4Q7 775 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 USHBP1Q8N6Y0 703 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 MAIP1Q8WWC4 291 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 NUDT16Q96DE0 195 aaKnown RBP8.35□□□□□ -1.07
PRDM2-201ENST00000235372 RHOXF2Q9BQY4 288 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 F8W8V4 182 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 RIMBP2O15034 1052 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 EFCAB14O75071 495 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 IFNL2Q8IZJ0 200 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
PRDM2-201ENST00000235372 KRT12Q99456 494 aa8.35□□□□□ -1.07
PRDM2-201ENST00000235372 OPHN1O60890 802 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 YARSP54577 528 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 ALDH1L2Q3SY69 923 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 RAB44Q7Z6P3 723 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 CSRNP1Q96S65 589 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 MAFGO15525 162 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 ZBED4O75132 1171 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 APOEP02649 317 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 IQCB1Q15051 598 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 IFT20Q8IY31 132 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 ZSCAN32Q9NX65 697 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 KCNG1Q9UIX4 513 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 CUL7Q14999 1698 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 DAPK1P53355 1430 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 IRX3P78415 501 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 FAM71BQ8TC56 605 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 ANKRD2Q9GZV1 360 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 TRPC6Q9Y210 931 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 TMPOP42166 694 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 CLNS1AP54105 237 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 BZW2Q9Y6E2 419 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 MYO18AQ92614 2054 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 ANKRD50Q9ULJ7 1429 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 GNGT2O14610 69 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 NVLO15381 856 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 RYBPQ8N488 228 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 AOPEPQ8N6M6 819 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 TRIML1Q8N9V2 468 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 HELBQ8NG08 1087 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 GLT8D2Q9H1C3 349 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 LZTFL1Q9NQ48 299 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 SUCLA2Q9P2R7 463 aaPredicted RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 WWC3Q9ULE0 1092 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 SLC8A2Q9UPR5 921 aa8.34□□□□□ -1.07
PRDM2-201ENST00000235372 DHX29Q7Z478 1369 aaKnown RBP8.34□□□□□ -1.07
PRDM2-201ENST00000235372 ARHGAP42A6NI28 874 aa8.34□□□□□ -1.08
PRDM2-201ENST00000235372 TROVE2P10155 538 aaKnown RBP eCLIP8.34□□□□□ -1.08
PRDM2-201ENST00000235372 HP1BP3Q5SSJ5 553 aaPredicted RBP8.34□□□□□ -1.08
PRDM2-201ENST00000235372 SYCE1Q8N0S2 351 aa8.34□□□□□ -1.08
PRDM2-201ENST00000235372 CCDC138Q96M89 665 aa8.34□□□□□ -1.08
PRDM2-201ENST00000235372 GIMAP4Q9NUV9 329 aa8.34□□□□□ -1.08
PRDM2-201ENST00000235372 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
PRDM2-201ENST00000235372 DDX21Q9NR30 783 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRDM2-201ENST00000235372 NPR1P16066 1061 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 KCNA4P22459 653 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 TPTE2Q6XPS3 522 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 KSR1Q8IVT5 923 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 UBN1Q9NPG3 1134 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 CCNT1O60563 726 aaKnown RBP8.33□□□□□ -1.08
PRDM2-201ENST00000235372 SNRPA1P09661 255 aaKnown RBP8.33□□□□□ -1.08
PRDM2-201ENST00000235372 TAF11Q15544 211 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 MUM1Q2TAK8 710 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 KHDRBS2Q5VWX1 349 aaKnown RBP8.33□□□□□ -1.08
PRDM2-201ENST00000235372 C1orf228Q6PIY5 440 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 AFAP1L1Q8TED9 768 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 ERBINQ96RT1 1412 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 GARSP41250 739 aaKnown RBP8.33□□□□□ -1.08
PRDM2-201ENST00000235372 DENND2CQ68D51 928 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 RUFY4Q6ZNE9 571 aa8.33□□□□□ -1.08
PRDM2-201ENST00000235372 NIP7Q9Y221 180 aaKnown RBP eCLIP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms