RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 TPRKBQ9Y3C4 175 aa0.43□□□□□ -2.34
LINC00428-201ENST00000415620 TRBV10-2A0A0K0K1G8 114 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 TEX46H3BTG2 121 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 PPBPP02775 128 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 SMIM13P0DJ93 91 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 LSM3P62310 102 aaKnown RBP0.42□□□□□ -2.34
LINC00428-201ENST00000415620 SEC11AP67812 179 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 S100A7L2Q5SY68 101 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 ERASQ7Z444 233 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 ADM2Q7Z4H4 148 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 SCGB1C1Q8TD33 95 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 CST9LQ9H4G1 147 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 R4GN34 69 aa0.42□□□□□ -2.34
LINC00428-201ENST00000415620 TINCRA0A1B0GVN0 87 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 A0A1W2PPM0 123 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 CCDC160A6NGH7 325 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 K7EQZ3 153 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 M0QZ58 72 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 PPP1R17O96001 155 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 C3orf79P0CE67 100 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 ELOF1P60002 83 aaKnown RBP0.41□□□□□ -2.34
LINC00428-201ENST00000415620 CENPWQ5EE01 88 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 SPINT4Q6UDR6 99 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 C1orf64Q8NEQ6 169 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 DSCR8Q96T75 97 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 SS18L2Q9UHA2 77 aa0.41□□□□□ -2.34
LINC00428-201ENST00000415620 TRBV24-1A0A075B6N3 115 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 A0A087WVE0 104 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 IGIPA6NJ69 53 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 S100A9P06702 114 aaKnown RBP0.4□□□□□ -2.35
LINC00428-201ENST00000415620 ATP6V0CP27449 155 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 HINT1P49773 126 aaPredicted RBP0.4□□□□□ -2.35
LINC00428-201ENST00000415620 LYRM7Q5U5X0 104 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 Q6JHZ5 121 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 C20orf78Q9BR46 151 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 TCEAL7Q9BRU2 100 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 PSMG3Q9BT73 122 aaPredicted RBP0.4□□□□□ -2.35
LINC00428-201ENST00000415620 ACTR3CQ9C0K3 210 aaPredicted RBP0.4□□□□□ -2.35
LINC00428-201ENST00000415620 SPANXB1Q9NS25 103 aaPredicted RBP0.4□□□□□ -2.35
LINC00428-201ENST00000415620 HSPB11Q9Y547 144 aa0.4□□□□□ -2.35
LINC00428-201ENST00000415620 H3BUT2 72 aa0.39□□□□□ -2.35
LINC00428-201ENST00000415620 NDUFB6O95139 128 aa0.39□□□□□ -2.35
LINC00428-201ENST00000415620 NPYP01303 97 aa0.39□□□□□ -2.35
LINC00428-201ENST00000415620 COX7BP24311 80 aa0.39□□□□□ -2.35
LINC00428-201ENST00000415620 RPL23P62829 140 aaKnown RBP0.39□□□□□ -2.35
LINC00428-201ENST00000415620 MRPS10P82664 201 aaKnown RBP0.39□□□□□ -2.35
LINC00428-201ENST00000415620 Q5BKY6 102 aa0.39□□□□□ -2.35
LINC00428-201ENST00000415620 SFT2D1Q8WV19 159 aa0.39□□□□□ -2.35
LINC00428-201ENST00000415620 CTXND1A0A1B0GTU2 59 aa0.38□□□□□ -2.35
LINC00428-201ENST00000415620 ZNF815PA8K554 130 aa0.38□□□□□ -2.35
LINC00428-201ENST00000415620 MEIG1Q5JSS6 88 aa0.38□□□□□ -2.35
LINC00428-201ENST00000415620 RPL7L1Q6DKI1 246 aaKnown RBP0.38□□□□□ -2.35
LINC00428-201ENST00000415620 MAP1LC3CQ9BXW4 147 aa0.38□□□□□ -2.35
LINC00428-201ENST00000415620 CYSLTR1Q9Y271 337 aa0.38□□□□□ -2.35
LINC00428-201ENST00000415620 A0A1B0GUT8 65 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 MAP1LC3B2A6NCE7 125 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 HMSDA8MTL9 139 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 C8orf87E5RJ46 101 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 H3BRM9 83 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 K7EN84 100 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 PLA2G10O15496 165 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 ZNF22P17026 224 aaPredicted RBP0.37□□□□□ -2.35
LINC00428-201ENST00000415620 ADCYAP1P18509 176 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 CKS2P33552 79 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 FAUP35544 74 aaKnown RBP0.37□□□□□ -2.35
LINC00428-201ENST00000415620 GNG4P50150 75 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 VBP1P61758 197 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 OCIAD2Q56VL3 154 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 C7orf65Q6ZTY9 151 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 MAP1LC3BQ9GZQ8 125 aa0.37□□□□□ -2.35
LINC00428-201ENST00000415620 TRAV13-2A0A0B4J235 113 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 A0A1B0GV50 99 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 MBP02144 154 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 NPC2P61916 151 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 NEDD8Q15843 81 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 FAM104BQ5XKR9 115 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 SFTA2Q6UW10 78 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 SLC7A5P1Q8MH63 180 aa0.36□□□□□ -2.35
LINC00428-201ENST00000415620 BORCS7-ASMTA0A0B4J1R7 106 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 LINC00862A6NCI5 91 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 HIGD1CA8MV81 97 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 RGS5O15539 181 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 LYRM1O43325 122 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 PFDN1O60925 122 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 NDUFC2O95298 119 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 IGLC3P0DOY3 106 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 SERF2P84101 59 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 TEN1Q86WV5 123 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 TOMM5Q8N4H5 51 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 OR13C6PQ8NH95 151 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 BORCS7Q96B45 105 aa0.35□□□□□ -2.35
LINC00428-201ENST00000415620 BPY2O14599 106 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 GATCO43716 136 aaKnown RBP0.34□□□□□ -2.36
LINC00428-201ENST00000415620 GNGT1P63211 74 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 CCL20P78556 96 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 BATFQ16520 125 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 RAB37Q96AX2 223 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 SMIM12Q96EX1 92 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 BLOC1S6Q9UL45 172 aa0.34□□□□□ -2.36
LINC00428-201ENST00000415620 C2orf91Q6ZV80 131 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms