RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RNF151Q2KHN1 245 aa9.96□□□□□ -0.82
ACTB-204ENST00000425660 SLPIP03973 132 aa9.95□□□□□ -0.82
ACTB-204ENST00000425660 COX6CP09669 75 aa9.95□□□□□ -0.82
ACTB-204ENST00000425660 Q8NDZ9 215 aa9.94□□□□□ -0.82
ACTB-204ENST00000425660 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
ACTB-204ENST00000425660 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
ACTB-204ENST00000425660 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
ACTB-204ENST00000425660 F8W1H4 67 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
ACTB-204ENST00000425660 Q6ZRP5 223 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 PRO0461Q9UI25 63 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 LECT2O14960 151 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 WFDC2Q14508 124 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 XAGE1AQ9HD64 81 aa9.91□□□□□ -0.82
ACTB-204ENST00000425660 TRBV10-2A0A0K0K1G8 114 aa9.9□□□□□ -0.82
ACTB-204ENST00000425660 PSCAO43653 123 aa9.9□□□□□ -0.82
ACTB-204ENST00000425660 Q6ZRN7 208 aaPredicted RBP9.9□□□□□ -0.82
ACTB-204ENST00000425660 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.82
ACTB-204ENST00000425660 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
ACTB-204ENST00000425660 ATXN8Q156A1 80 aa9.89□□□□□ -0.83
ACTB-204ENST00000425660 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
ACTB-204ENST00000425660 LST1O00453 97 aa9.88□□□□□ -0.83
ACTB-204ENST00000425660 CNBPP62633 177 aaKnown RBP9.88□□□□□ -0.83
ACTB-204ENST00000425660 NCR3O14931 201 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 VPREB1P12018 145 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 C14orf177Q52M58 125 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 CLEC2BQ92478 149 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 IGLV6-57P01721 117 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
ACTB-204ENST00000425660 Q6ZR54 194 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
ACTB-204ENST00000425660 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
ACTB-204ENST00000425660 LINC01620Q4KN68 170 aa9.84□□□□□ -0.83
ACTB-204ENST00000425660 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
ACTB-204ENST00000425660 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
ACTB-204ENST00000425660 S100A7L2Q5SY68 101 aa9.84□□□□□ -0.83
ACTB-204ENST00000425660 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
ACTB-204ENST00000425660 H0YGX0 51 aa9.83□□□□□ -0.84
ACTB-204ENST00000425660 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
ACTB-204ENST00000425660 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
ACTB-204ENST00000425660 C9JAW5 83 aa9.82□□□□□ -0.84
ACTB-204ENST00000425660 M0QXV9 152 aa9.82□□□□□ -0.84
ACTB-204ENST00000425660 M0R2N4 97 aa9.82□□□□□ -0.84
ACTB-204ENST00000425660 FAM218AQ96MZ4 157 aa9.82□□□□□ -0.84
ACTB-204ENST00000425660 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
ACTB-204ENST00000425660 SLC25A20O43772 301 aa9.81□□□□□ -0.84
ACTB-204ENST00000425660 TRACP01848 142 aa9.81□□□□□ -0.84
ACTB-204ENST00000425660 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
ACTB-204ENST00000425660 M0R378 163 aa9.8□□□□□ -0.84
ACTB-204ENST00000425660 C3orf84H3BNL1 204 aa9.79□□□□□ -0.84
ACTB-204ENST00000425660 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
ACTB-204ENST00000425660 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
ACTB-204ENST00000425660 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.84
ACTB-204ENST00000425660 ETDBQ3ZM63 59 aa9.77□□□□□ -0.84
ACTB-204ENST00000425660 C6orf99Q4VX62 202 aa9.77□□□□□ -0.84
ACTB-204ENST00000425660 SERTAD4-AS1Q5TG53 156 aa9.77□□□□□ -0.84
ACTB-204ENST00000425660 ANKRD29Q8N6D5 301 aa9.77□□□□□ -0.84
ACTB-204ENST00000425660 H3BT86 120 aa9.77□□□□□ -0.85
ACTB-204ENST00000425660 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.76□□□□□ -0.85
ACTB-204ENST00000425660 TRAV23DV6A0A075B6W5 121 aa9.76□□□□□ -0.85
ACTB-204ENST00000425660 C16orf90A8MZG2 172 aa9.76□□□□□ -0.85
ACTB-204ENST00000425660 LY6G6CO95867 125 aa9.76□□□□□ -0.85
ACTB-204ENST00000425660 GAGE2BQ13066 116 aa9.76□□□□□ -0.85
ACTB-204ENST00000425660 A0A087WYN8 130 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 OCIAD2Q56VL3 154 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 Q8N814 137 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 A0A1B0GX51 115 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 KRTAP7-1Q8IUC3 87 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 CBY1Q9Y3M2 126 aa9.75□□□□□ -0.85
ACTB-204ENST00000425660 A0A087WTM6 91 aa9.74□□□□□ -0.85
ACTB-204ENST00000425660 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
ACTB-204ENST00000425660 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
ACTB-204ENST00000425660 A0A096LNI7 61 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 ZNF73O43830 326 aaPredicted RBP9.72□□□□□ -0.85
ACTB-204ENST00000425660 C1orf134Q5TEV5 83 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 ALMS1Q8TCU4 4167 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 TRBV7-6A0A0J9YX20 115 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 KCNQ1DNQ9H478 68 aa9.72□□□□□ -0.85
ACTB-204ENST00000425660 DNAL4O96015 105 aa9.7□□□□□ -0.86
ACTB-204ENST00000425660 LINC00575Q6W349 94 aa9.7□□□□□ -0.86
ACTB-204ENST00000425660 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
ACTB-204ENST00000425660 K7ERU9 68 aa9.7□□□□□ -0.86
ACTB-204ENST00000425660 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
ACTB-204ENST00000425660 SDIM1Q6ZPB5 146 aa9.69□□□□□ -0.86
ACTB-204ENST00000425660 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
ACTB-204ENST00000425660 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
ACTB-204ENST00000425660 DNAH17Q9UFH2 4485 aa9.68□□□□□ -0.86
ACTB-204ENST00000425660 IGLV1-50A0A075B6I6 118 aa9.68□□□□□ -0.86
ACTB-204ENST00000425660 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
ACTB-204ENST00000425660 BAALC-AS2P0C853 105 aa9.67□□□□□ -0.86
ACTB-204ENST00000425660 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms