RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 WFDC2Q14508 124 aa16.77■□□□□ 0.27
CPNE1-205ENST00000401607 DNAH10Q8IVF4 4471 aa16.76■□□□□ 0.27
CPNE1-205ENST00000401607 NDUFC2-KCTD14E9PQ53 114 aa16.76■□□□□ 0.27
CPNE1-205ENST00000401607 CARD19Q96LW7 228 aa16.76■□□□□ 0.27
CPNE1-205ENST00000401607 XAGE1AQ9HD64 81 aa16.75■□□□□ 0.27
CPNE1-205ENST00000401607 COX6CP09669 75 aa16.72■□□□□ 0.27
CPNE1-205ENST00000401607 RNF151Q2KHN1 245 aa16.72■□□□□ 0.27
CPNE1-205ENST00000401607 PSCAO43653 123 aa16.72■□□□□ 0.27
CPNE1-205ENST00000401607 RPL28P46779 137 aaKnown RBP16.72■□□□□ 0.27
CPNE1-205ENST00000401607 Q6ZRP5 223 aa16.72■□□□□ 0.27
CPNE1-205ENST00000401607 OR13C6PQ8NH95 151 aa16.71■□□□□ 0.27
CPNE1-205ENST00000401607 NCR3O14931 201 aa16.7■□□□□ 0.26
CPNE1-205ENST00000401607 SMIM11BQ8TCY0 68 aa16.7■□□□□ 0.26
CPNE1-205ENST00000401607 PRO0461Q9UI25 63 aa16.7■□□□□ 0.26
CPNE1-205ENST00000401607 MTURNQ8N3F0 131 aa16.69■□□□□ 0.26
CPNE1-205ENST00000401607 TENM2Q9NT68 2774 aa16.69■□□□□ 0.26
CPNE1-205ENST00000401607 CLEC2BQ92478 149 aa16.69■□□□□ 0.26
CPNE1-205ENST00000401607 WWC2-AS2Q96NR7 200 aa16.69■□□□□ 0.26
CPNE1-205ENST00000401607 TLX1NBP0CAT3 122 aa16.68■□□□□ 0.26
CPNE1-205ENST00000401607 GAGE2EQ4V326 116 aa16.68■□□□□ 0.26
CPNE1-205ENST00000401607 GAGE2DQ9UEU5 116 aa16.68■□□□□ 0.26
CPNE1-205ENST00000401607 ATXN8Q156A1 80 aa16.67■□□□□ 0.26
CPNE1-205ENST00000401607 Q6ZRN7 208 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-205ENST00000401607 F8W1H4 67 aa16.65■□□□□ 0.26
CPNE1-205ENST00000401607 M0R2N4 97 aa16.64■□□□□ 0.25
CPNE1-205ENST00000401607 TRBV10-2A0A0K0K1G8 114 aa16.63■□□□□ 0.25
CPNE1-205ENST00000401607 LST1O00453 97 aa16.63■□□□□ 0.25
CPNE1-205ENST00000401607 VPREB1P12018 145 aa16.63■□□□□ 0.25
CPNE1-205ENST00000401607 C9orf129Q5T035 196 aaKnown RBP16.63■□□□□ 0.25
CPNE1-205ENST00000401607 TMEM126AQ9H061 195 aa16.63■□□□□ 0.25
CPNE1-205ENST00000401607 RPL18AQ02543 176 aaKnown RBP16.62■□□□□ 0.25
CPNE1-205ENST00000401607 SMCPP49901 116 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-205ENST00000401607 LRCOL1A6NCL2 159 aa16.61■□□□□ 0.25
CPNE1-205ENST00000401607 LINC01620Q4KN68 170 aa16.61■□□□□ 0.25
CPNE1-205ENST00000401607 CNBPP62633 177 aaKnown RBP16.59■□□□□ 0.25
CPNE1-205ENST00000401607 S100A7L2Q5SY68 101 aa16.59■□□□□ 0.25
CPNE1-205ENST00000401607 Q6ZR54 194 aa16.59■□□□□ 0.25
CPNE1-205ENST00000401607 IGLV6-57P01721 117 aa16.58■□□□□ 0.24
CPNE1-205ENST00000401607 C14orf177Q52M58 125 aa16.58■□□□□ 0.24
CPNE1-205ENST00000401607 FAM218AQ96MZ4 157 aa16.58■□□□□ 0.24
CPNE1-205ENST00000401607 C9JAW5 83 aa16.57■□□□□ 0.24
CPNE1-205ENST00000401607 LOC107984640A0A0U1RRK4 108 aa16.54■□□□□ 0.24
CPNE1-205ENST00000401607 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-205ENST00000401607 TRBV10-3A0A0K0K1G6 114 aa16.53■□□□□ 0.24
CPNE1-205ENST00000401607 SLC25A20O43772 301 aa16.53■□□□□ 0.24
CPNE1-205ENST00000401607 H0YGX0 51 aa16.52■□□□□ 0.24
CPNE1-205ENST00000401607 GAGE2BQ13066 116 aa16.52■□□□□ 0.24
CPNE1-205ENST00000401607 SERTAD4-AS1Q5TG53 156 aa16.52■□□□□ 0.24
CPNE1-205ENST00000401607 M0R378 163 aa16.51■□□□□ 0.23
CPNE1-205ENST00000401607 LY6G6CO95867 125 aa16.51■□□□□ 0.23
CPNE1-205ENST00000401607 PLA2G2DQ9UNK4 145 aa16.51■□□□□ 0.23
CPNE1-205ENST00000401607 ETDBQ3ZM63 59 aa16.5■□□□□ 0.23
CPNE1-205ENST00000401607 LINC00476Q8WZB0 136 aa16.5■□□□□ 0.23
CPNE1-205ENST00000401607 TGP01266 2768 aa16.5■□□□□ 0.23
CPNE1-205ENST00000401607 TRACP01848 142 aa16.49■□□□□ 0.23
CPNE1-205ENST00000401607 A0A087WYN8 130 aa16.49■□□□□ 0.23
CPNE1-205ENST00000401607 C6orf99Q4VX62 202 aa16.49■□□□□ 0.23
CPNE1-205ENST00000401607 KMT2AQ03164 3969 aa16.48■□□□□ 0.23
CPNE1-205ENST00000401607 DNAH6Q9C0G6 4158 aa16.47■□□□□ 0.23
CPNE1-205ENST00000401607 FAM168BA1KXE4 195 aa16.46■□□□□ 0.23
CPNE1-205ENST00000401607 C3orf84H3BNL1 204 aa16.46■□□□□ 0.23
CPNE1-205ENST00000401607 M0QXV9 152 aa16.46■□□□□ 0.23
CPNE1-205ENST00000401607 LINC01600Q96MT4 127 aa16.46■□□□□ 0.23
CPNE1-205ENST00000401607 KRTAP7-1Q8IUC3 87 aa16.46■□□□□ 0.22
CPNE1-205ENST00000401607 ANKRD29Q8N6D5 301 aa16.46■□□□□ 0.22
CPNE1-205ENST00000401607 ALMS1Q8TCU4 4167 aa16.45■□□□□ 0.22
CPNE1-205ENST00000401607 TRAV23DV6A0A075B6W5 121 aa16.45■□□□□ 0.22
CPNE1-205ENST00000401607 DNAH2Q9P225 4427 aa16.44■□□□□ 0.22
CPNE1-205ENST00000401607 IGLV5-37A0A075B6J1 123 aa16.43■□□□□ 0.22
CPNE1-205ENST00000401607 OCIAD2Q56VL3 154 aa16.43■□□□□ 0.22
CPNE1-205ENST00000401607 Q8N814 137 aa16.43■□□□□ 0.22
CPNE1-205ENST00000401607 NKAPP1Q8N9T2 125 aa16.43■□□□□ 0.22
CPNE1-205ENST00000401607 A0A096LNI7 61 aa16.43■□□□□ 0.22
CPNE1-205ENST00000401607 A0A087WTM6 91 aa16.42■□□□□ 0.22
CPNE1-205ENST00000401607 H3BT86 120 aa16.42■□□□□ 0.22
CPNE1-205ENST00000401607 C16orf90A8MZG2 172 aa16.41■□□□□ 0.22
CPNE1-205ENST00000401607 C9orf163Q8N9P6 203 aa16.41■□□□□ 0.22
CPNE1-205ENST00000401607 C7orf33Q8WU49 177 aa16.41■□□□□ 0.22
CPNE1-205ENST00000401607 TEN1Q86WV5 123 aa16.4■□□□□ 0.22
CPNE1-205ENST00000401607 C1orf134Q5TEV5 83 aa16.38■□□□□ 0.21
CPNE1-205ENST00000401607 ZNF73O43830 326 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-205ENST00000401607 DIRC1Q969H9 104 aa16.38■□□□□ 0.21
CPNE1-205ENST00000401607 IGKV2-24A0A0C4DH68 120 aa16.37■□□□□ 0.21
CPNE1-205ENST00000401607 FAM19A5Q7Z5A7 132 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-205ENST00000401607 C22orf24Q9Y442 160 aa16.36■□□□□ 0.21
CPNE1-205ENST00000401607 A0A1B0GX51 115 aa16.35■□□□□ 0.21
CPNE1-205ENST00000401607 DNAL4O96015 105 aa16.34■□□□□ 0.21
CPNE1-205ENST00000401607 LINC00575Q6W349 94 aa16.34■□□□□ 0.21
CPNE1-205ENST00000401607 CBY1Q9Y3M2 126 aa16.33■□□□□ 0.21
CPNE1-205ENST00000401607 LINC00167Q96N53 147 aa16.33■□□□□ 0.2
CPNE1-205ENST00000401607 KCNQ1DNQ9H478 68 aa16.33■□□□□ 0.2
CPNE1-205ENST00000401607 BAALC-AS2P0C853 105 aa16.32■□□□□ 0.2
CPNE1-205ENST00000401607 SDIM1Q6ZPB5 146 aa16.32■□□□□ 0.2
CPNE1-205ENST00000401607 DNAH17Q9UFH2 4485 aa16.31■□□□□ 0.2
CPNE1-205ENST00000401607 K7ERU9 68 aa16.31■□□□□ 0.2
CPNE1-205ENST00000401607 TRBV7-6A0A0J9YX20 115 aa16.31■□□□□ 0.2
CPNE1-205ENST00000401607 A0A1W2PNN7 141 aa16.31■□□□□ 0.2
CPNE1-205ENST00000401607 CHTF8P0CG12 524 aa16.31■□□□□ 0.2
CPNE1-205ENST00000401607 MRPL55Q7Z7F7 128 aaKnown RBP16.31■□□□□ 0.2
CPNE1-205ENST00000401607 IGLV1-50A0A075B6I6 118 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms