RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 WIPF1O43516 503 aa12.86□□□□□ -0.35
ITGA6-201ENST00000264107 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
ITGA6-201ENST00000264107 ANKHD1Q8IWZ3 2542 aaKnown RBP12.84□□□□□ -0.35
ITGA6-201ENST00000264107 IGLV5-39A0A0G2JS06 123 aa12.83□□□□□ -0.36
ITGA6-201ENST00000264107 C8orf87E5RJ46 101 aa12.82□□□□□ -0.36
ITGA6-201ENST00000264107 CUL9Q8IWT3 2517 aa12.82□□□□□ -0.36
ITGA6-201ENST00000264107 NOTCH2Q04721 2471 aa12.81□□□□□ -0.36
ITGA6-201ENST00000264107 C14orf177Q52M58 125 aa12.81□□□□□ -0.36
ITGA6-201ENST00000264107 A8MUN3 132 aa12.81□□□□□ -0.36
ITGA6-201ENST00000264107 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
ITGA6-201ENST00000264107 A0A087WSZ3 146 aa12.8□□□□□ -0.36
ITGA6-201ENST00000264107 LELP1Q5T871 98 aa12.8□□□□□ -0.36
ITGA6-201ENST00000264107 Q6ZSN1 163 aa12.8□□□□□ -0.36
ITGA6-201ENST00000264107 Q8NA96 180 aa12.79□□□□□ -0.36
ITGA6-201ENST00000264107 COL5A1P20908 1838 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-201ENST00000264107 EGFEM1PQ0D2K5 195 aa12.79□□□□□ -0.36
ITGA6-201ENST00000264107 KPRPQ5T749 579 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-201ENST00000264107 IGLV9-49A0A0B4J1Y8 123 aa12.78□□□□□ -0.36
ITGA6-201ENST00000264107 Q6ZQT0 140 aa12.78□□□□□ -0.36
ITGA6-201ENST00000264107 LINC00482Q8N8I6 264 aa12.78□□□□□ -0.36
ITGA6-201ENST00000264107 DEFB113Q30KQ7 82 aa12.77□□□□□ -0.36
ITGA6-201ENST00000264107 EP400Q96L91 3159 aa12.77□□□□□ -0.36
ITGA6-201ENST00000264107 CACNA1AO00555 2505 aa12.77□□□□□ -0.37
ITGA6-201ENST00000264107 IGHV6-1A0A0B4J1U7 121 aa12.76□□□□□ -0.37
ITGA6-201ENST00000264107 FBXL19-AS1Q494R0 122 aa12.76□□□□□ -0.37
ITGA6-201ENST00000264107 A0A1B0GU69 56 aa12.75□□□□□ -0.37
ITGA6-201ENST00000264107 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
ITGA6-201ENST00000264107 MDFIQ99750 246 aa12.74□□□□□ -0.37
ITGA6-201ENST00000264107 IGLV1-40P01703 118 aa12.73□□□□□ -0.37
ITGA6-201ENST00000264107 CEP192Q8TEP8 1941 aa12.73□□□□□ -0.37
ITGA6-201ENST00000264107 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 CSPG4Q6UVK1 2322 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 LOC110117498A0A087WWA1 95 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 C6orf223Q8N319 242 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 KTN1-AS1Q86SY8 53 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.72□□□□□ -0.37
ITGA6-201ENST00000264107 C2orf48Q96LS8 159 aa12.72□□□□□ -0.37
ITGA6-201ENST00000264107 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.71□□□□□ -0.38
ITGA6-201ENST00000264107 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
ITGA6-201ENST00000264107 KLKP1Q107X0 134 aa12.7□□□□□ -0.38
ITGA6-201ENST00000264107 ZNF706Q9Y5V0 76 aaPredicted RBP12.7□□□□□ -0.38
ITGA6-201ENST00000264107 LINC00315P59091 139 aa12.7□□□□□ -0.38
ITGA6-201ENST00000264107 SPINK1P00995 79 aa12.7□□□□□ -0.38
ITGA6-201ENST00000264107 FSHBP01225 129 aa12.7□□□□□ -0.38
ITGA6-201ENST00000264107 Q6YL49 198 aa12.7□□□□□ -0.38
ITGA6-201ENST00000264107 CYP4F30PQ9H0H9 118 aa12.69□□□□□ -0.38
ITGA6-201ENST00000264107 OTOGLQ3ZCN5 2332 aa12.69□□□□□ -0.38
ITGA6-201ENST00000264107 DEFB131BA0A096LNP1 70 aa12.68□□□□□ -0.38
ITGA6-201ENST00000264107 ERC2-IT1O76042 136 aa12.68□□□□□ -0.38
ITGA6-201ENST00000264107 H7BZZ5 65 aa12.68□□□□□ -0.38
ITGA6-201ENST00000264107 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
ITGA6-201ENST00000264107 C19orf84I3L1E1 186 aa12.67□□□□□ -0.38
ITGA6-201ENST00000264107 ATP11AUNQ6ZP68 121 aa12.67□□□□□ -0.38
ITGA6-201ENST00000264107 Q9BRP9 147 aa12.66□□□□□ -0.38
ITGA6-201ENST00000264107 LITAFQ99732 161 aa12.66□□□□□ -0.38
ITGA6-201ENST00000264107 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.38
ITGA6-201ENST00000264107 C18orf65Q6ZTR6 163 aa12.65□□□□□ -0.38
ITGA6-201ENST00000264107 KIAA0087Q14695 138 aa12.64□□□□□ -0.39
ITGA6-201ENST00000264107 C7orf65Q6ZTY9 151 aa12.63□□□□□ -0.39
ITGA6-201ENST00000264107 H3BPC8 53 aa12.63□□□□□ -0.39
ITGA6-201ENST00000264107 RETNLBQ9BQ08 111 aa12.63□□□□□ -0.39
ITGA6-201ENST00000264107 Q6ZTC4 211 aa12.62□□□□□ -0.39
ITGA6-201ENST00000264107 LCA10Q71F78 164 aa12.62□□□□□ -0.39
ITGA6-201ENST00000264107 A0A1B0GUV1 79 aa12.61□□□□□ -0.39
ITGA6-201ENST00000264107 TRAV22A0A0B4J277 110 aa12.6□□□□□ -0.39
ITGA6-201ENST00000264107 ZNF702PQ9H963 129 aa12.6□□□□□ -0.39
ITGA6-201ENST00000264107 IGHV3OR16-9A0A0B4J2B5 98 aa12.6□□□□□ -0.39
ITGA6-201ENST00000264107 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
ITGA6-201ENST00000264107 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
ITGA6-201ENST00000264107 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
ITGA6-201ENST00000264107 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
ITGA6-201ENST00000264107 ACYP2P14621 99 aa12.59□□□□□ -0.39
ITGA6-201ENST00000264107 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
ITGA6-201ENST00000264107 TET2Q6N021 2002 aaPredicted RBP12.58□□□□□ -0.4
ITGA6-201ENST00000264107 HIVEP2P31629 2446 aa12.58□□□□□ -0.4
ITGA6-201ENST00000264107 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
ITGA6-201ENST00000264107 A0A1B0GW54 56 aa12.56□□□□□ -0.4
ITGA6-201ENST00000264107 PRR15Q8IV56 129 aa12.56□□□□□ -0.4
ITGA6-201ENST00000264107 CPAMD8Q8IZJ3 1885 aa12.56□□□□□ -0.4
ITGA6-201ENST00000264107 TP53AIP1Q9HCN2 124 aa12.55□□□□□ -0.4
ITGA6-201ENST00000264107 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
ITGA6-201ENST00000264107 MUC22E2RYF6 1773 aaPredicted RBP12.55□□□□□ -0.4
ITGA6-201ENST00000264107 BRI3O95415 125 aa12.55□□□□□ -0.4
ITGA6-201ENST00000264107 SPINT4Q6UDR6 99 aa12.54□□□□□ -0.4
ITGA6-201ENST00000264107 LOC101927531A0A1B0GV80 90 aa12.53□□□□□ -0.4
ITGA6-201ENST00000264107 C6orf48Q9UBA6 75 aa12.53□□□□□ -0.4
ITGA6-201ENST00000264107 ADAMTS20P59510 1910 aa12.52□□□□□ -0.4
ITGA6-201ENST00000264107 COA5Q86WW8 74 aa12.52□□□□□ -0.41
ITGA6-201ENST00000264107 X6R8D5 127 aa12.51□□□□□ -0.41
ITGA6-201ENST00000264107 NCOR2Q9Y618 2525 aa12.51□□□□□ -0.41
ITGA6-201ENST00000264107 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
ITGA6-201ENST00000264107 PTPRBP23467 1997 aa12.5□□□□□ -0.41
ITGA6-201ENST00000264107 DSCAMO60469 2012 aa12.5□□□□□ -0.41
ITGA6-201ENST00000264107 ELOF1P60002 83 aaKnown RBP12.5□□□□□ -0.41
ITGA6-201ENST00000264107 LRP4O75096 1905 aa12.5□□□□□ -0.41
ITGA6-201ENST00000264107 Q6ZRU5 148 aa12.49□□□□□ -0.41
ITGA6-201ENST00000264107 Q8NBF4 154 aa12.48□□□□□ -0.41
ITGA6-201ENST00000264107 PIEZO2Q9H5I5 2752 aa12.47□□□□□ -0.41
ITGA6-201ENST00000264107 IGF2RP11717 2491 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms