RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 FHL2Q14192 279 aa7.48□□□□□ -1.21
VCL-201ENST00000211998 C10orf25Q5T742 122 aa7.48□□□□□ -1.21
VCL-201ENST00000211998 Q8N2B8 174 aa7.48□□□□□ -1.21
VCL-201ENST00000211998 FHL3Q13643 280 aa7.47□□□□□ -1.21
VCL-201ENST00000211998 C2CD3Q4AC94 2353 aa7.47□□□□□ -1.21
VCL-201ENST00000211998 MUC22E2RYF6 1773 aaPredicted RBP7.46□□□□□ -1.21
VCL-201ENST00000211998 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.46□□□□□ -1.21
VCL-201ENST00000211998 CUL9Q8IWT3 2517 aa7.46□□□□□ -1.22
VCL-201ENST00000211998 A8MTW9 85 aa7.46□□□□□ -1.22
VCL-201ENST00000211998 SMIM29Q86T20 159 aa7.46□□□□□ -1.22
VCL-201ENST00000211998 C10orf142B7Z368 130 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 HCG22E2RYF7 251 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 SPG11Q96JI7 2443 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 FAM218AQ96MZ4 157 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 DEFB116Q30KQ4 102 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 NAV3Q8IVL0 2385 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 LINC00474Q9P2X8 69 aa7.45□□□□□ -1.22
VCL-201ENST00000211998 OTOGLQ3ZCN5 2332 aa7.44□□□□□ -1.22
VCL-201ENST00000211998 LINC00336Q6ZUF6 198 aa7.44□□□□□ -1.22
VCL-201ENST00000211998 PLA2G2AP14555 144 aa7.44□□□□□ -1.22
VCL-201ENST00000211998 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
VCL-201ENST00000211998 NOTCH2Q04721 2471 aa7.43□□□□□ -1.22
VCL-201ENST00000211998 C18orf65Q6ZTR6 163 aa7.43□□□□□ -1.22
VCL-201ENST00000211998 LINC01561Q8N1V8 128 aa7.43□□□□□ -1.22
VCL-201ENST00000211998 F8WDY8 70 aa7.43□□□□□ -1.22
VCL-201ENST00000211998 EDN2P20800 178 aa7.42□□□□□ -1.22
VCL-201ENST00000211998 Q6ZSN1 163 aa7.42□□□□□ -1.22
VCL-201ENST00000211998 SPATA3Q8NHX4 192 aa7.42□□□□□ -1.22
VCL-201ENST00000211998 CEP192Q8TEP8 1941 aa7.42□□□□□ -1.22
VCL-201ENST00000211998 C1orf64Q8NEQ6 169 aa7.41□□□□□ -1.22
VCL-201ENST00000211998 IGLV9-49A0A0B4J1Y8 123 aa7.41□□□□□ -1.22
VCL-201ENST00000211998 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
VCL-201ENST00000211998 UTRNP46939 3433 aa7.41□□□□□ -1.22
VCL-201ENST00000211998 SPAG11AQ6PDA7 123 aa7.41□□□□□ -1.22
VCL-201ENST00000211998 CSPG4Q6UVK1 2322 aa7.4□□□□□ -1.22
VCL-201ENST00000211998 GOLGB1Q14789 3259 aaKnown RBP7.4□□□□□ -1.22
VCL-201ENST00000211998 BRI3O95415 125 aa7.4□□□□□ -1.22
VCL-201ENST00000211998 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.23
VCL-201ENST00000211998 PRRC2AP48634 2157 aaKnown RBP7.4□□□□□ -1.23
VCL-201ENST00000211998 A0A087WSZ3 146 aa7.39□□□□□ -1.23
VCL-201ENST00000211998 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
VCL-201ENST00000211998 EGFEM1PQ0D2K5 195 aa7.39□□□□□ -1.23
VCL-201ENST00000211998 EXPH5Q8NEV8 1989 aa7.39□□□□□ -1.23
VCL-201ENST00000211998 ATRXP46100 2492 aa7.39□□□□□ -1.23
VCL-201ENST00000211998 IGHV6-1A0A0B4J1U7 121 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 ODF3L2Q3SX64 289 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 AVPP01185 164 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 CD164Q04900 197 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 IGLV1-51P01701 117 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 CDSNQ15517 529 aa7.38□□□□□ -1.23
VCL-201ENST00000211998 C6orf223Q8N319 242 aa7.37□□□□□ -1.23
VCL-201ENST00000211998 M0R2N4 97 aa7.37□□□□□ -1.23
VCL-201ENST00000211998 LY6G6CO95867 125 aa7.37□□□□□ -1.23
VCL-201ENST00000211998 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
VCL-201ENST00000211998 COL5A1P20908 1838 aaPredicted RBP7.36□□□□□ -1.23
VCL-201ENST00000211998 Q6ZQT0 140 aa7.36□□□□□ -1.23
VCL-201ENST00000211998 LRP4O75096 1905 aa7.36□□□□□ -1.23
VCL-201ENST00000211998 PTPN13Q12923 2485 aa7.36□□□□□ -1.23
VCL-201ENST00000211998 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
VCL-201ENST00000211998 CACNA1AO00555 2505 aa7.35□□□□□ -1.23
VCL-201ENST00000211998 PIEZO1Q92508 2521 aa7.35□□□□□ -1.23
VCL-201ENST00000211998 A8MUN3 132 aa7.35□□□□□ -1.23
VCL-201ENST00000211998 C8orf87E5RJ46 101 aa7.34□□□□□ -1.23
VCL-201ENST00000211998 SPINK1P00995 79 aa7.34□□□□□ -1.23
VCL-201ENST00000211998 REG3GQ6UW15 175 aa7.34□□□□□ -1.23
VCL-201ENST00000211998 SONP18583 2426 aaKnown RBP7.34□□□□□ -1.23
VCL-201ENST00000211998 A0A1B0GU69 56 aa7.34□□□□□ -1.23
VCL-201ENST00000211998 LINC00315P59091 139 aa7.34□□□□□ -1.24
VCL-201ENST00000211998 NAV2Q8IVL1 2488 aa7.33□□□□□ -1.24
VCL-201ENST00000211998 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
VCL-201ENST00000211998 Q9BRP9 147 aa7.33□□□□□ -1.24
VCL-201ENST00000211998 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
VCL-201ENST00000211998 FSHBP01225 129 aa7.31□□□□□ -1.24
VCL-201ENST00000211998 KRTAP10-9P60411 292 aa7.31□□□□□ -1.24
VCL-201ENST00000211998 KIAA0087Q14695 138 aa7.31□□□□□ -1.24
VCL-201ENST00000211998 WIPF1O43516 503 aa7.3□□□□□ -1.24
VCL-201ENST00000211998 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
VCL-201ENST00000211998 SMR3AQ99954 134 aa7.29□□□□□ -1.24
VCL-201ENST00000211998 A0A1B0GUV1 79 aa7.29□□□□□ -1.24
VCL-201ENST00000211998 LITAFQ99732 161 aa7.29□□□□□ -1.24
VCL-201ENST00000211998 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
VCL-201ENST00000211998 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
VCL-201ENST00000211998 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
VCL-201ENST00000211998 MDFIQ99750 246 aa7.28□□□□□ -1.24
VCL-201ENST00000211998 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
VCL-201ENST00000211998 Q6ZTC4 211 aa7.27□□□□□ -1.25
VCL-201ENST00000211998 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
VCL-201ENST00000211998 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
VCL-201ENST00000211998 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
VCL-201ENST00000211998 H7BZZ5 65 aa7.26□□□□□ -1.25
VCL-201ENST00000211998 KTN1-AS1Q86SY8 53 aa7.26□□□□□ -1.25
VCL-201ENST00000211998 A0A1W2PPR1 153 aa7.26□□□□□ -1.25
VCL-201ENST00000211998 H3BPC8 53 aa7.25□□□□□ -1.25
VCL-201ENST00000211998 IGLV5-52A0A0A0MRZ9 124 aa7.25□□□□□ -1.25
VCL-201ENST00000211998 C11orf72Q8NBR9 251 aa7.25□□□□□ -1.25
VCL-201ENST00000211998 ACYP2P14621 99 aa7.25□□□□□ -1.25
VCL-201ENST00000211998 X6R8D5 127 aa7.24□□□□□ -1.25
VCL-201ENST00000211998 CPAMD8Q8IZJ3 1885 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms