RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SMIM11BQ8TCY0 68 aa14.49□□□□□ -0.09
CACNA1A-257ENST00000638009 IGLV9-49A0A0B4J1Y8 123 aa14.49□□□□□ -0.09
CACNA1A-257ENST00000638009 DEFB4AO15263 64 aa14.49□□□□□ -0.09
CACNA1A-257ENST00000638009 XAGE1AQ9HD64 81 aa14.49□□□□□ -0.09
CACNA1A-257ENST00000638009 TRBV10-3A0A0K0K1G6 114 aa14.48□□□□□ -0.09
CACNA1A-257ENST00000638009 PRAC2D3DTV9 90 aa14.48□□□□□ -0.09
CACNA1A-257ENST00000638009 PATE2Q6UY27 113 aa14.48□□□□□ -0.09
CACNA1A-257ENST00000638009 PRRC2CQ9Y520 2896 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-257ENST00000638009 LY6G6EA0A0G2JKS1 128 aa14.47□□□□□ -0.09
CACNA1A-257ENST00000638009 M0QY20 66 aa14.46□□□□□ -0.09
CACNA1A-257ENST00000638009 CEMP1Q6PRD7 247 aaPredicted RBP14.46□□□□□ -0.09
CACNA1A-257ENST00000638009 H0Y9P7 68 aa14.46□□□□□ -0.09
CACNA1A-257ENST00000638009 LINC01547P58512 204 aaPredicted RBP14.46□□□□□ -0.09
CACNA1A-257ENST00000638009 C11orf53Q8IXP5 236 aa14.45□□□□□ -0.1
CACNA1A-257ENST00000638009 FAM215AQ9Y5M1 114 aa14.45□□□□□ -0.1
CACNA1A-257ENST00000638009 TRAV10A0A0B4J240 114 aa14.45□□□□□ -0.1
CACNA1A-257ENST00000638009 Q8IZM0 81 aa14.45□□□□□ -0.1
CACNA1A-257ENST00000638009 A8MZ25 164 aa14.45□□□□□ -0.1
CACNA1A-257ENST00000638009 PRORYQ9H606 182 aa14.45□□□□□ -0.1
CACNA1A-257ENST00000638009 DCANP1Q8TF63 244 aa14.44□□□□□ -0.1
CACNA1A-257ENST00000638009 SOSTDC1Q6X4U4 206 aa14.44□□□□□ -0.1
CACNA1A-257ENST00000638009 F8WDY8 70 aa14.44□□□□□ -0.1
CACNA1A-257ENST00000638009 LELP1Q5T871 98 aa14.44□□□□□ -0.1
CACNA1A-257ENST00000638009 PLAC8L1A1L4L8 177 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 Q6ZTI0 123 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 RSPO1Q2MKA7 263 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 C8orf87E5RJ46 101 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 RBX1P62877 108 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 C1orf137Q5JT78 98 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 LOC100131303A0A0U1RQF7 123 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 PLA2G2AP14555 144 aa14.43□□□□□ -0.1
CACNA1A-257ENST00000638009 P0C879 139 aa14.42□□□□□ -0.1
CACNA1A-257ENST00000638009 MRGPRG-AS1Q2M3A8 158 aa14.42□□□□□ -0.1
CACNA1A-257ENST00000638009 RITA1Q96K30 269 aa14.42□□□□□ -0.1
CACNA1A-257ENST00000638009 LTBP2Q14767 1821 aa14.42□□□□□ -0.1
CACNA1A-257ENST00000638009 IGF2RP11717 2491 aa14.42□□□□□ -0.1
CACNA1A-257ENST00000638009 KRTAP27-1Q3LI81 207 aa14.41□□□□□ -0.1
CACNA1A-257ENST00000638009 TP53AIP1Q9HCN2 124 aa14.41□□□□□ -0.1
CACNA1A-257ENST00000638009 ZNF843Q8N446 348 aa14.41□□□□□ -0.1
CACNA1A-257ENST00000638009 Q8N814 137 aa14.41□□□□□ -0.1
CACNA1A-257ENST00000638009 PROK2Q9HC23 129 aa14.4□□□□□ -0.1
CACNA1A-257ENST00000638009 REG3GQ6UW15 175 aa14.4□□□□□ -0.1
CACNA1A-257ENST00000638009 ZNF503-AS2A6NEH8 195 aa14.4□□□□□ -0.1
CACNA1A-257ENST00000638009 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-257ENST00000638009 CRYGAP11844 174 aa14.39□□□□□ -0.11
CACNA1A-257ENST00000638009 A0A1B0GU69 56 aa14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 COL4A5P29400 1685 aa14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 DAZAP2Q15038 168 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 XGP55808 180 aa14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 UNQ9165/PRO28630Q6UXU0 137 aa14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 Q8N3U1 123 aa14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 CIRBP-AS1Q8TBR5 109 aa14.38□□□□□ -0.11
CACNA1A-257ENST00000638009 IGLV1-47P01700 117 aa14.37□□□□□ -0.11
CACNA1A-257ENST00000638009 IGF2-ASQ6U949 168 aa14.36□□□□□ -0.11
CACNA1A-257ENST00000638009 ACYP2P14621 99 aa14.36□□□□□ -0.11
CACNA1A-257ENST00000638009 PPDPFQ9H3Y8 114 aa14.35□□□□□ -0.11
CACNA1A-257ENST00000638009 DNAJC9-AS1A6NH13 148 aa14.35□□□□□ -0.11
CACNA1A-257ENST00000638009 HCG22E2RYF7 251 aa14.35□□□□□ -0.11
CACNA1A-257ENST00000638009 NRGNQ92686 78 aa14.35□□□□□ -0.11
CACNA1A-257ENST00000638009 K7EQG2 157 aa14.35□□□□□ -0.11
CACNA1A-257ENST00000638009 Q6ZSR3 168 aa14.34□□□□□ -0.11
CACNA1A-257ENST00000638009 IGHV6-1A0A0B4J1U7 121 aa14.34□□□□□ -0.11
CACNA1A-257ENST00000638009 ODF3BA8MYP8 253 aa14.33□□□□□ -0.11
CACNA1A-257ENST00000638009 CLUHP3Q96NS8 147 aa14.33□□□□□ -0.11
CACNA1A-257ENST00000638009 SPINT4Q6UDR6 99 aa14.32□□□□□ -0.12
CACNA1A-257ENST00000638009 KPRPQ5T749 579 aaPredicted RBP14.32□□□□□ -0.12
CACNA1A-257ENST00000638009 DEFB114Q30KQ6 69 aa14.31□□□□□ -0.12
CACNA1A-257ENST00000638009 FSHBP01225 129 aa14.31□□□□□ -0.12
CACNA1A-257ENST00000638009 C2orf91Q6ZV80 131 aa14.31□□□□□ -0.12
CACNA1A-257ENST00000638009 TNFRSF13BO14836 293 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-257ENST00000638009 PLA2G1BP04054 148 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-257ENST00000638009 RPL37AP8A6NKH3 93 aa14.3□□□□□ -0.12
CACNA1A-257ENST00000638009 Q8N6K4 173 aa14.3□□□□□ -0.12
CACNA1A-257ENST00000638009 BEAN1Q3B7T3 259 aa14.29□□□□□ -0.12
CACNA1A-257ENST00000638009 POM121L12Q8N7R1 296 aa14.29□□□□□ -0.12
CACNA1A-257ENST00000638009 CHCHD7Q9BUK0 85 aa14.29□□□□□ -0.12
CACNA1A-257ENST00000638009 COL4A1P02462 1669 aa14.29□□□□□ -0.12
CACNA1A-257ENST00000638009 FSTL3O95633 263 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 EPG5Q9HCE0 2579 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 C7orf65Q6ZTY9 151 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 MAPKAPK5-AS1Q8N8E1 139 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 LINC00574Q9H8X3 128 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 ZNF702PQ9H963 129 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 TP53TG3Q9ULZ0 132 aa14.28□□□□□ -0.12
CACNA1A-257ENST00000638009 A0A1B0GW54 56 aa14.27□□□□□ -0.13
CACNA1A-257ENST00000638009 EGFEM1PQ0D2K5 195 aa14.27□□□□□ -0.13
CACNA1A-257ENST00000638009 IGLV2-14P01704 120 aa14.27□□□□□ -0.13
CACNA1A-257ENST00000638009 ZNF80P51504 273 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-257ENST00000638009 TSHBP01222 138 aa14.26□□□□□ -0.13
CACNA1A-257ENST00000638009 LINC00575Q6W349 94 aa14.26□□□□□ -0.13
CACNA1A-257ENST00000638009 RPS28P62857 69 aaKnown RBP14.26□□□□□ -0.13
CACNA1A-257ENST00000638009 IGFL2Q6UWQ7 119 aa14.25□□□□□ -0.13
CACNA1A-257ENST00000638009 SHISA2Q6UWI4 295 aa14.24□□□□□ -0.13
CACNA1A-257ENST00000638009 LINC00959A0A1B0GUT2 108 aa14.24□□□□□ -0.13
CACNA1A-257ENST00000638009 SPINK1P00995 79 aa14.24□□□□□ -0.13
CACNA1A-257ENST00000638009 Q6ZTC4 211 aa14.23□□□□□ -0.13
CACNA1A-257ENST00000638009 CNFNQ9BYD5 112 aa14.23□□□□□ -0.13
CACNA1A-257ENST00000638009 NUPR2A6NF83 97 aa14.23□□□□□ -0.13
CACNA1A-257ENST00000638009 GDF5OSQ5U4N7 250 aa14.23□□□□□ -0.13
CACNA1A-257ENST00000638009 FBXL19-AS1Q494R0 122 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms