RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 C2orf82Q6UX34 121 aa4.83□□□□□ -1.64
CLCN3-208ENST00000512813 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
CLCN3-208ENST00000512813 CSDC2Q9Y534 153 aaKnown RBP4.83□□□□□ -1.64
CLCN3-208ENST00000512813 GAGE10A6NGK3 116 aa4.82□□□□□ -1.64
CLCN3-208ENST00000512813 RPS20P60866 119 aaKnown RBP4.82□□□□□ -1.64
CLCN3-208ENST00000512813 FAM210AQ96ND0 272 aa4.82□□□□□ -1.64
CLCN3-208ENST00000512813 CCDC32Q9BV29 185 aa4.82□□□□□ -1.64
CLCN3-208ENST00000512813 TPPP3Q9BW30 176 aa4.82□□□□□ -1.64
CLCN3-208ENST00000512813 NKX6-2Q9C056 277 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-208ENST00000512813 A0A087WXM4 84 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 C7orf77A4D0Y5 90 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 NAP1L6A6NFF2 107 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 PMCHP20382 165 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
CLCN3-208ENST00000512813 PYDC2Q56P42 97 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 TMEM242Q9NWH2 141 aa4.81□□□□□ -1.64
CLCN3-208ENST00000512813 FAM74A7A6NL05 159 aa4.8□□□□□ -1.64
CLCN3-208ENST00000512813 RPL32P62910 135 aaKnown RBP4.8□□□□□ -1.64
CLCN3-208ENST00000512813 FAM19A1Q7Z5A9 133 aa4.8□□□□□ -1.64
CLCN3-208ENST00000512813 CBLN2Q8IUK8 224 aa4.8□□□□□ -1.64
CLCN3-208ENST00000512813 HSPB11Q9Y547 144 aa4.8□□□□□ -1.64
CLCN3-208ENST00000512813 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
CLCN3-208ENST00000512813 Q6ZUT4 128 aa4.79□□□□□ -1.64
CLCN3-208ENST00000512813 SMIM3Q9BZL3 60 aa4.79□□□□□ -1.64
CLCN3-208ENST00000512813 RNASE7Q9H1E1 156 aaKnown RBP4.79□□□□□ -1.64
CLCN3-208ENST00000512813 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
CLCN3-208ENST00000512813 V9GYH0 126 aa4.79□□□□□ -1.64
CLCN3-208ENST00000512813 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
CLCN3-208ENST00000512813 H0YIZ8 118 aa4.78□□□□□ -1.64
CLCN3-208ENST00000512813 BTCP35070 178 aa4.78□□□□□ -1.64
CLCN3-208ENST00000512813 AKR1C3P42330 323 aa4.78□□□□□ -1.64
CLCN3-208ENST00000512813 SMAGPQ0VAQ4 97 aa4.78□□□□□ -1.64
CLCN3-208ENST00000512813 TCEAL7Q9BRU2 100 aa4.78□□□□□ -1.64
CLCN3-208ENST00000512813 ZNF706Q9Y5V0 76 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-208ENST00000512813 IGKV2-28A0A075B6P5 120 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 F2Z2F3 143 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 IGKV2D-28P01615 120 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 DEFA1P59665 94 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 TEX261Q6UWH6 196 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 HIGD2AQ9BW72 106 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 TMEM126AQ9H061 195 aa4.77□□□□□ -1.65
CLCN3-208ENST00000512813 INMT-MINDY4F8WBC2 141 aa4.76□□□□□ -1.65
CLCN3-208ENST00000512813 CNPY1Q3B7I2 92 aa4.76□□□□□ -1.65
CLCN3-208ENST00000512813 SEC22CQ9BRL7 303 aa4.76□□□□□ -1.65
CLCN3-208ENST00000512813 MBP02144 154 aa4.75□□□□□ -1.65
CLCN3-208ENST00000512813 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
CLCN3-208ENST00000512813 NKAPP1Q8N9T2 125 aa4.75□□□□□ -1.65
CLCN3-208ENST00000512813 ACTR3CQ9C0K3 210 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-208ENST00000512813 TGIF2-C20orf24A0A0A6YYL0 155 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 C20orf202A1L168 122 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 TMEM238C9JI98 176 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 IFNA1P01562 189 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 SSBP3-AS1Q7Z2R9 100 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 LINC01551Q86U37 167 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 TIMM21Q9BVV7 248 aa4.74□□□□□ -1.65
CLCN3-208ENST00000512813 TRBV27A0A0K0K1C4 114 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 M0R378 163 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 S100A9P06702 114 aaKnown RBP4.73□□□□□ -1.65
CLCN3-208ENST00000512813 ATP6V0CP27449 155 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 FHITP49789 147 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 MOBPQ13875 183 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 BAGE2Q86Y30 109 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
CLCN3-208ENST00000512813 CNFNQ9BYD5 112 aa4.73□□□□□ -1.65
CLCN3-208ENST00000512813 CCDC160A6NGH7 325 aa4.72□□□□□ -1.65
CLCN3-208ENST00000512813 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
CLCN3-208ENST00000512813 SERF2P84101 59 aa4.72□□□□□ -1.65
CLCN3-208ENST00000512813 LINC00483Q53H64 154 aa4.72□□□□□ -1.65
CLCN3-208ENST00000512813 ST20Q9HBF5 79 aa4.72□□□□□ -1.65
CLCN3-208ENST00000512813 SCO1O75880 301 aa4.71□□□□□ -1.66
CLCN3-208ENST00000512813 TWIST1Q15672 202 aa4.71□□□□□ -1.66
CLCN3-208ENST00000512813 ZNF726P1Q15940 193 aa4.71□□□□□ -1.66
CLCN3-208ENST00000512813 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
CLCN3-208ENST00000512813 FAM104AQ969W3 186 aa4.71□□□□□ -1.66
CLCN3-208ENST00000512813 TNFSF18Q9UNG2 199 aa4.71□□□□□ -1.66
CLCN3-208ENST00000512813 CTXND1A0A1B0GTU2 59 aa4.7□□□□□ -1.66
CLCN3-208ENST00000512813 CENPXA8MT69 81 aa4.7□□□□□ -1.66
CLCN3-208ENST00000512813 CKS1BP61024 79 aa4.7□□□□□ -1.66
CLCN3-208ENST00000512813 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 XKRY2A2RUG3 117 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 IFITM10A6NMD0 228 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 FCER1GP30273 86 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 TRIQKQ629K1 86 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 FAM231DQ6ZW35 169 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 C9orf62Q8N4C0 152 aa4.69□□□□□ -1.66
CLCN3-208ENST00000512813 SIX6O95475 246 aa4.68□□□□□ -1.66
CLCN3-208ENST00000512813 PRSS2P07478 247 aa4.68□□□□□ -1.66
CLCN3-208ENST00000512813 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
CLCN3-208ENST00000512813 LINC01561Q8N1V8 128 aa4.68□□□□□ -1.66
CLCN3-208ENST00000512813 F8VRH5 84 aa4.67□□□□□ -1.66
CLCN3-208ENST00000512813 EIF4EBP3O60516 100 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-208ENST00000512813 HBBP68871 147 aa4.67□□□□□ -1.66
CLCN3-208ENST00000512813 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
CLCN3-208ENST00000512813 PPP1R1CQ8WVI7 109 aa4.67□□□□□ -1.66
CLCN3-208ENST00000512813 MRPS36P82909 103 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms