RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LECT2O14960 151 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV1-47P01700 117 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV2-23P01705 113 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV1-46P01743 117 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV1-8P0DP01 117 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPINT3P49223 89 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 CNBPP62633 177 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 REG3AQ06141 175 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 RNASE13Q5GAN3 156 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 KPRPQ5T749 579 aaPredicted RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 LYZL1Q6UWQ5 148 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 C7orf33Q8WU49 177 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 ZCCHC13Q8WW36 166 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 NDUFA4L2Q9NRX3 87 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 PLAC8Q9NZF1 115 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 MRPL36Q9P0J6 103 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 KLK12Q9UKR0 248 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 FAM215AQ9Y5M1 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 SNURFQ9Y675 71 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRPM6Q9BX84 2022 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 PCDH15Q96QU1 1955 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LCTP09848 1927 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV11-55A0A075B6I3 123 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV2-18A0A075B6J9 118 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3OR16-8A0A075B7F1 116 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LOC110117498A0A087WWA1 95 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRAV10A0A0B4J240 114 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV1-3A0A0C4DH29 117 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-64DA0A0J9YX35 117 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 A6NDX4 124 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 H7C2G1 150 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LHBP01229 141 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV3-25P01717 112 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 CLPSP04118 112 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 CGB3P0DN86 165 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 CGB7P0DN87 165 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 TFF3Q07654 80 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LUZP6Q538Z0 58 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 C1orf137Q5JT78 98 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 C1orf134Q5TEV5 83 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 SFTA2Q6UW10 78 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LYPD1Q8N2G4 141 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 C14orf178Q8N769 122 aaPredicted RBP1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8N9W7 124 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 PRR15LQ9BU68 103 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 SMIM2Q9BVW6 85 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC01558Q9Y6Z2 57 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 NCOA6Q14686 2063 aaPredicted RBP1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 COL5A1P20908 1838 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 A8MWP4 228 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 PANO1I0J062 215 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 M0R1W7 72 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 NDUFA3O95167 84 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV3-1P01715 115 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 IAPPP10997 89 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 FXYD4P59646 89 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC00322Q6ZN03 302 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q6ZQT0 140 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 COX7B2Q8TF08 81 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 HIGD2AQ9BW72 106 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 KLK9Q9UKQ9 250 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 TIMM8BQ9Y5J9 83 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 TANC2Q9HCD6 1990 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 NUMA1Q14980 2115 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 KIAA2026Q5HYC2 2103 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 DYSFO75923 2080 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1D-42A0A075B6H8 117 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV4-69A0A075B6H9 119 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 TRAV21A0A0B4J279 112 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 A0A1W2PNM2 257 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 B4DSR2 109 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 C10orf142B7Z368 130 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNF861PO60384 105 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNF137PP52743 207 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 CMC4P56277 68 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 MIR22HGQ0VDD5 57 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 NNATQ16517 81 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 KRTAP26-1Q6PEX3 210 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 TMEM105Q8N8V8 129 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 C15orf56Q8N910 161 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEC1Q9P2X7 70 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 DSCAML1Q8TD84 2053 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGHV1-18A0A0C4DH31 117 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 A0A1B0GVX0 72 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ODF3BA8MYP8 253 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 H0Y9P7 68 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 UQCR11O14957 56 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 MGPP08493 103 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 LINC00315P59091 139 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ERHP84090 104 aaKnown RBP1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPAG11BQ08648 103 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 HCP5Q6MZN7 132 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms