RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TAX1BP3O14907 124 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 DEFB4AO15263 64 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 SPINK8P0C7L1 97 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 RRN3P1Q2M238 152 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 SPATA45Q537H7 98 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 LYRM7Q5U5X0 104 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 FAM222AQ5U5X8 452 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
ZNF540-204ENST00000586792 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
ZNF540-204ENST00000586792 ATP5L2Q7Z4Y8 100 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 RNF182Q8N6D2 247 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 GNPNAT1Q96EK6 184 aaPredicted RBP3.31□□□□□ -1.88
ZNF540-204ENST00000586792 RNF185Q96GF1 192 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 NPCDR1Q9BY65 106 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 SLC39A9Q9NUM3 307 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 TIMM9Q9Y5J7 89 aa3.31□□□□□ -1.88
ZNF540-204ENST00000586792 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV10A0A0B4J240 114 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 LY6G6CO95867 125 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 SPART-AS1P0CW21 52 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 IFITM1P13164 125 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 HLA-DMBP28068 263 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
ZNF540-204ENST00000586792 MP68P56378 58 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 TAS2R45P59539 299 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 DEFB1P60022 68 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 SPINK13Q1W4C9 94 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 C12orf74Q32Q52 190 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 AMMECR1LQ6DCA0 310 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 Q8NAQ8 132 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 NUP35Q8NFH5 326 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 OR8A1Q8NGG7 326 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 IGF2BP2-AS1Q96M15 143 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 LINC01587Q99440 93 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 PRADC1Q9BSG0 188 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 IMUPQ9GZP8 106 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 C11orf1Q9H5F2 150 aa3.3□□□□□ -1.88
ZNF540-204ENST00000586792 IGLL5B9A064 214 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 H3BMG7 143 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 CXCL1P09341 107 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 HTN1P15515 57 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 CSN1S1P47710 185 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 UBE2L3P68036 154 aaKnown RBP3.29□□□□□ -1.88
ZNF540-204ENST00000586792 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
ZNF540-204ENST00000586792 PDE6HQ13956 83 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 BVES-AS1Q5T3Y7 98 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 SLC25A34Q6PIV7 304 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 ZNF493Q6ZR52 646 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 Q6ZRU5 148 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 DAZ4Q86SG3 579 aaKnown RBP3.29□□□□□ -1.88
ZNF540-204ENST00000586792 TMEM256Q8N2U0 113 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 OR10AG1Q8NH19 301 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 TXNDC17Q9BRA2 123 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 SLC25A2Q9BXI2 301 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 DAZ3Q9NR90 486 aaKnown RBP3.29□□□□□ -1.88
ZNF540-204ENST00000586792 TMEM14CQ9P0S9 112 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 COL7A1Q02388 2944 aa3.29□□□□□ -1.88
ZNF540-204ENST00000586792 TRBV19A0A075B6N1 114 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 TRAV12-2A0A075B6T6 113 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 DEFB131BA0A096LNP1 70 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 IGHV6-1A0A0B4J1U7 121 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 GGTLC3B5MD39 225 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 C9JAW5 83 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 GIG44P09565 113 aaPredicted RBP3.28□□□□□ -1.88
ZNF540-204ENST00000586792 PYYP10082 97 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 HTN3P15516 51 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 ZNF138P52744 262 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 ERCC8Q13216 396 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 RBMY1FQ15415 496 aaKnown RBP3.28□□□□□ -1.88
ZNF540-204ENST00000586792 Q6AWC8 147 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 RPP25LQ8N5L8 163 aaKnown RBP3.28□□□□□ -1.88
ZNF540-204ENST00000586792 NKAPP1Q8N9T2 125 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 FXYD5Q96DB9 178 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 C16orf74Q96GX8 76 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 CYTL1Q9NRR1 136 aa3.28□□□□□ -1.88
ZNF540-204ENST00000586792 A0A1W2PPM0 123 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 DPM2O94777 84 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 HINT1P49773 126 aaPredicted RBP3.27□□□□□ -1.89
ZNF540-204ENST00000586792 TMEM258P61165 79 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 HERVK_113P61574 105 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 RASL11AQ6T310 242 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 Q6ZUT4 128 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 MIR17HGQ75NE6 70 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 UBE2DNLQ8IWF7 75 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 C18orf32Q8TCD1 76 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 TMEM263Q8WUH6 116 aaKnown RBP3.27□□□□□ -1.89
ZNF540-204ENST00000586792 ODF3Q96PU9 254 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 VGLL1Q99990 258 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 TMEM243Q9BU79 118 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms