RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
RNF40-208ENST00000565995 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
RNF40-208ENST00000565995 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
RNF40-208ENST00000565995 PANO1I0J062 215 aa8.15□□□□□ -1.1
RNF40-208ENST00000565995 UBE2D3P61077 147 aa8.15□□□□□ -1.1
RNF40-208ENST00000565995 UBE2D2P62837 147 aa8.15□□□□□ -1.1
RNF40-208ENST00000565995 KIAA1644Q3SXP7 199 aa8.15□□□□□ -1.1
RNF40-208ENST00000565995 ORMDL3Q8N138 153 aa8.15□□□□□ -1.1
RNF40-208ENST00000565995 TRBV7-3A0A075B6L6 115 aa8.14□□□□□ -1.11
RNF40-208ENST00000565995 PPBPP02775 128 aa8.14□□□□□ -1.11
RNF40-208ENST00000565995 TRGC2P03986 189 aa8.14□□□□□ -1.11
RNF40-208ENST00000565995 MIAQ16674 131 aa8.14□□□□□ -1.11
RNF40-208ENST00000565995 KRTAP26-1Q6PEX3 210 aa8.14□□□□□ -1.11
RNF40-208ENST00000565995 PRELID3AQ96N28 172 aa8.14□□□□□ -1.11
RNF40-208ENST00000565995 TRBV6-8A0A0A6YYG3 113 aa8.13□□□□□ -1.11
RNF40-208ENST00000565995 M0QY20 66 aa8.13□□□□□ -1.11
RNF40-208ENST00000565995 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
RNF40-208ENST00000565995 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
RNF40-208ENST00000565995 RPL39LQ96EH5 51 aaKnown RBP8.13□□□□□ -1.11
RNF40-208ENST00000565995 PPP1R17O96001 155 aa8.12□□□□□ -1.11
RNF40-208ENST00000565995 NPYP01303 97 aa8.12□□□□□ -1.11
RNF40-208ENST00000565995 MPV17L2Q567V2 206 aa8.12□□□□□ -1.11
RNF40-208ENST00000565995 PRR34Q9NV39 138 aa8.12□□□□□ -1.11
RNF40-208ENST00000565995 GAS8-AS1O95177 125 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 TNFRSF6BO95407 300 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 CRPP02741 224 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 PKIAP61925 76 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
RNF40-208ENST00000565995 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
RNF40-208ENST00000565995 TMEM262E9PQX1 116 aa8.1□□□□□ -1.11
RNF40-208ENST00000565995 NRACQ8N912 160 aa8.1□□□□□ -1.11
RNF40-208ENST00000565995 ALKBH7Q9BT30 221 aaPredicted RBP8.1□□□□□ -1.11
RNF40-208ENST00000565995 MAP1LC3AQ9H492 121 aa8.1□□□□□ -1.11
RNF40-208ENST00000565995 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
RNF40-208ENST00000565995 LOC389332A0A1B0GUA5 103 aa8.09□□□□□ -1.11
RNF40-208ENST00000565995 C1orf196B1AJZ1 125 aa8.09□□□□□ -1.11
RNF40-208ENST00000565995 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
RNF40-208ENST00000565995 SUMO2P61956 95 aaKnown RBP8.09□□□□□ -1.11
RNF40-208ENST00000565995 SDHAF1A6NFY7 115 aa8.08□□□□□ -1.12
RNF40-208ENST00000565995 PHOX2AO14813 284 aa8.08□□□□□ -1.12
RNF40-208ENST00000565995 PMCHP20382 165 aa8.08□□□□□ -1.12
RNF40-208ENST00000565995 IQCJQ1A5X6 159 aa8.08□□□□□ -1.12
RNF40-208ENST00000565995 TRBV6-5A0A0K0K1A5 114 aa8.07□□□□□ -1.12
RNF40-208ENST00000565995 RAB5BP61020 215 aa8.07□□□□□ -1.12
RNF40-208ENST00000565995 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
RNF40-208ENST00000565995 SMIM2Q9BVW6 85 aa8.07□□□□□ -1.12
RNF40-208ENST00000565995 PLAC8Q9NZF1 115 aa8.07□□□□□ -1.12
RNF40-208ENST00000565995 A0A087WYN8 130 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 FCER1GP30273 86 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 TMEM97Q5BJF2 176 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 NTM-AS1Q6ZSK4 140 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 BAGE3Q86Y29 109 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 PRSS3P2Q8NHM4 247 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 KIR2DL4Q99706 377 aa8.06□□□□□ -1.12
RNF40-208ENST00000565995 IGHV3-64A0A075B6Q5 118 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 I3L3M4 83 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 VCYO14598 125 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 SLPIP03973 132 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 COTL1Q14019 142 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 RNASEKQ6P5S7 137 aaKnown RBP8.05□□□□□ -1.12
RNF40-208ENST00000565995 FA2HQ7L5A8 372 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 IFI27P40305 119 aaPredicted RBP8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 RBX1P62877 108 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
RNF40-208ENST00000565995 LINC00269Q8N2A0 174 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 Q8N8P6 123 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
RNF40-208ENST00000565995 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
RNF40-208ENST00000565995 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
RNF40-208ENST00000565995 TRAV8-4A0A0B4J246 113 aa8.03□□□□□ -1.12
RNF40-208ENST00000565995 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
RNF40-208ENST00000565995 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
RNF40-208ENST00000565995 AMTP48728 403 aa8.03□□□□□ -1.12
RNF40-208ENST00000565995 POLR2KP53803 58 aaKnown RBP8.03□□□□□ -1.12
RNF40-208ENST00000565995 TCAPO15273 167 aa8.02□□□□□ -1.13
RNF40-208ENST00000565995 RPL32P62910 135 aaKnown RBP8.02□□□□□ -1.13
RNF40-208ENST00000565995 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
RNF40-208ENST00000565995 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
RNF40-208ENST00000565995 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
RNF40-208ENST00000565995 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
RNF40-208ENST00000565995 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
RNF40-208ENST00000565995 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
RNF40-208ENST00000565995 TSHBP01222 138 aa8.01□□□□□ -1.13
RNF40-208ENST00000565995 CHTF8P0CG12 524 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms