RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SMIM15Q7Z3B0 74 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 FAM19A5Q7Z5A7 132 aaPredicted RBP4.54□□□□□ -1.68
PDPN-205ENST00000487038 GATD1Q8NB37 220 aa4.54□□□□□ -1.68
PDPN-205ENST00000487038 F8WDY8 70 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 G3V3Q6 166 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 I3L3M4 83 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 M0QXV9 152 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 IFNA1P01562 189 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 RPL35P42766 123 aaKnown RBP4.53□□□□□ -1.68
PDPN-205ENST00000487038 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 TWIST1Q15672 202 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 LYZL1Q6UWQ5 148 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 TMUB2Q71RG4 321 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 OR10D4PQ8NGN7 298 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
PDPN-205ENST00000487038 SMIM12Q96EX1 92 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
PDPN-205ENST00000487038 CDC42SE2Q9NRR3 84 aa4.53□□□□□ -1.68
PDPN-205ENST00000487038 MRPL35Q9NZE8 188 aaKnown RBP4.53□□□□□ -1.68
PDPN-205ENST00000487038 FAM168BA1KXE4 195 aa4.52□□□□□ -1.69
PDPN-205ENST00000487038 NDUFA1O15239 70 aa4.52□□□□□ -1.69
PDPN-205ENST00000487038 DEFA1P59665 94 aa4.52□□□□□ -1.69
PDPN-205ENST00000487038 MRPL52Q86TS9 123 aaKnown RBP4.52□□□□□ -1.69
PDPN-205ENST00000487038 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
PDPN-205ENST00000487038 RPP21Q9H633 154 aaKnown RBP4.52□□□□□ -1.69
PDPN-205ENST00000487038 BIN3Q9NQY0 253 aa4.52□□□□□ -1.69
PDPN-205ENST00000487038 C7orf77A4D0Y5 90 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 NUPR1O60356 82 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 ZNF861PO60384 105 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 CTRLP40313 264 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 CENPWQ5EE01 88 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 ALG5Q9Y673 324 aa4.51□□□□□ -1.69
PDPN-205ENST00000487038 FXYD6-FXYD2A0A087WZ82 144 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 A0A1B0GV50 99 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 CRYGAP11844 174 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 GNG4P50150 75 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 TMEM241Q24JQ0 296 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 C9orf62Q8N4C0 152 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 KCNRGQ8N5I3 272 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 SFT2D1Q8WV19 159 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 CNFNQ9BYD5 112 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 TMEM242Q9NWH2 141 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 NDUFA13Q9P0J0 144 aa4.5□□□□□ -1.69
PDPN-205ENST00000487038 TRAV13-1A0A0B4J241 112 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 TSHBP01222 138 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 GAGE2EQ4V326 116 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 C5orf38Q86SI9 138 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 FAM213BQ8TBF2 198 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 ORAOV1Q8WV07 137 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 C11orf52Q96A22 123 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 SMDT1Q9H4I9 107 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 ST20Q9HBF5 79 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 MANBALQ9NQG1 85 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
PDPN-205ENST00000487038 IGLV7-46A0A075B6I9 117 aa4.48□□□□□ -1.69
PDPN-205ENST00000487038 A0A087X002 238 aa4.48□□□□□ -1.69
PDPN-205ENST00000487038 UMAD1C9J7I0 102 aa4.48□□□□□ -1.69
PDPN-205ENST00000487038 GIPP09681 153 aaPredicted RBP4.48□□□□□ -1.69
PDPN-205ENST00000487038 SRSF3P84103 164 aaKnown RBP4.48□□□□□ -1.69
PDPN-205ENST00000487038 LINC00173Q6ZV60 143 aa4.48□□□□□ -1.69
PDPN-205ENST00000487038 MBD3L1Q8WWY6 194 aa4.48□□□□□ -1.69
PDPN-205ENST00000487038 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
PDPN-205ENST00000487038 FCER1GP30273 86 aa4.47□□□□□ -1.69
PDPN-205ENST00000487038 RPL28P46779 137 aaKnown RBP4.47□□□□□ -1.69
PDPN-205ENST00000487038 CCL20P78556 96 aa4.47□□□□□ -1.69
PDPN-205ENST00000487038 IFITM3Q01628 133 aa4.47□□□□□ -1.69
PDPN-205ENST00000487038 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
PDPN-205ENST00000487038 TMEM18Q96B42 140 aa4.47□□□□□ -1.69
PDPN-205ENST00000487038 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
PDPN-205ENST00000487038 TRBV27A0A0K0K1C4 114 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 RAB19A4D1S5 217 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 NDUFC2-KCTD14E9PQ53 114 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 H2AFB1P0C5Y9 115 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 CTAG1AP78358 180 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 RNASE13Q5GAN3 156 aaKnown RBP4.46□□□□□ -1.7
PDPN-205ENST00000487038 BORCS7Q96B45 105 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
PDPN-205ENST00000487038 C6orf48Q9UBA6 75 aa4.46□□□□□ -1.7
PDPN-205ENST00000487038 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 TEX46H3BTG2 121 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 ARPC5O15511 151 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 PDE6DO43924 150 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 LBHQ53QV2 105 aaPredicted RBP4.45□□□□□ -1.7
PDPN-205ENST00000487038 Q5BKY6 102 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 Q6ZUT4 128 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 NUDT10Q8NFP7 164 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 NUDT11Q96G61 164 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 PACRGQ96M98 296 aaPredicted RBP4.45□□□□□ -1.7
PDPN-205ENST00000487038 KIR2DL4Q99706 377 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 CTDSP1Q9GZU7 261 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 CYTL1Q9NRR1 136 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 GNG13Q9P2W3 67 aa4.45□□□□□ -1.7
PDPN-205ENST00000487038 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
PDPN-205ENST00000487038 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms