RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 BRPF1P55201 1214 aaPredicted RBP7.5□□□□□ -1.21
USP3-215ENST00000559771 ZNF280AP59817 542 aaPredicted RBP7.5□□□□□ -1.21
USP3-215ENST00000559771 GNAI1P63096 354 aa7.5□□□□□ -1.21
USP3-215ENST00000559771 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
USP3-215ENST00000559771 CCDC85AQ96PX6 553 aaPredicted RBP7.5□□□□□ -1.21
USP3-215ENST00000559771 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
USP3-215ENST00000559771 A0A1B0GUL6 1792 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 PDE8AO60658 829 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 UFL1O94874 794 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 RGS19P49795 217 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 HUNKP57058 714 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 KIF4BQ2VIQ3 1234 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 C6orf118Q5T5N4 469 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 RBM26Q5T8P6 1007 aaKnown RBP7.49□□□□□ -1.21
USP3-215ENST00000559771 G2E3Q7L622 706 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 KRT26Q7Z3Y9 468 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 TTLL11Q8NHH1 800 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
USP3-215ENST00000559771 EYA3Q99504 573 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
USP3-215ENST00000559771 MAP3K2Q9Y2U5 619 aa7.49□□□□□ -1.21
USP3-215ENST00000559771 PI4KAP2A4QPH2 592 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 ADH1CP00326 375 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 FURINP09958 794 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 CASP7P55210 303 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 NOGQ13253 232 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 CWF19L2Q2TBE0 894 aaKnown RBP7.48□□□□□ -1.21
USP3-215ENST00000559771 Q3C1V9 767 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 CCDC152Q4G0S7 254 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 RGMBQ6NW40 437 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
USP3-215ENST00000559771 KSR2Q6VAB6 950 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 PI4KAP1Q8N8J0 262 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
USP3-215ENST00000559771 MCOLN1Q9GZU1 580 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 GREM2Q9H772 168 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 GBA2Q9HCG7 927 aaPredicted RBP7.48□□□□□ -1.21
USP3-215ENST00000559771 GGA3Q9NZ52 723 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 GGA1Q9UJY5 639 aa7.48□□□□□ -1.21
USP3-215ENST00000559771 SCAF8Q9UPN6 1271 aaKnown RBP7.48□□□□□ -1.21
USP3-215ENST00000559771 PAPPA2Q9BXP8 1791 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 H7C1W4 665 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 CA12O43570 354 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 CTSWP56202 376 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 KIF23Q02241 960 aaPredicted RBP7.47□□□□□ -1.21
USP3-215ENST00000559771 DACT2Q5SW24 774 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 ANGEL2Q5VTE6 544 aaKnown RBP7.47□□□□□ -1.21
USP3-215ENST00000559771 CCDC30Q5VVM6 783 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 WWC1Q8IX03 1113 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 AGBL3Q8NEM8 1001 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 DCPSQ96C86 337 aaKnown RBP7.47□□□□□ -1.21
USP3-215ENST00000559771 CDCA5Q96FF9 252 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 BEGAINQ9BUH8 593 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 MINPP1Q9UNW1 487 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 XDHP47989 1333 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 IRS2Q9Y4H2 1338 aa7.47□□□□□ -1.21
USP3-215ENST00000559771 MED23Q9ULK4 1368 aa7.46□□□□□ -1.21
USP3-215ENST00000559771 CCDC85CA6NKD9 419 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 ATP2B4P23634 1241 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 KLRK1P26718 216 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 CALD1Q05682 793 aaKnown RBP7.46□□□□□ -1.22
USP3-215ENST00000559771 CCDC27Q2M243 656 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 MOB2Q70IA6 237 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 PODNQ7Z5L7 613 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 ANKRD18AQ8IVF6 992 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 CSRNP1Q96S65 589 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 MYOZ2Q9NPC6 264 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 BSDC1Q9NW68 430 aaPredicted RBP7.46□□□□□ -1.22
USP3-215ENST00000559771 RNF186Q9NXI6 227 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 AKAP11Q9UKA4 1901 aa7.46□□□□□ -1.22
USP3-215ENST00000559771 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 DDX58O95786 925 aaKnown RBP7.45□□□□□ -1.22
USP3-215ENST00000559771 CSF1RP07333 972 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 USP17L8P0C7I0 530 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
USP3-215ENST00000559771 ZNF157P51786 506 aaPredicted RBP7.45□□□□□ -1.22
USP3-215ENST00000559771 PTSQ03393 145 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 GCKRQ14397 625 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 TWISTNBQ3B726 338 aaPredicted RBP7.45□□□□□ -1.22
USP3-215ENST00000559771 PRAMEF18Q5VWM3 479 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 UBE3BQ7Z3V4 1068 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 RASAL3Q86YV0 1011 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 SULF1Q8IWU6 871 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 C2orf69Q8N8R5 385 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 ZBED3Q96IU2 234 aaPredicted RBP7.45□□□□□ -1.22
USP3-215ENST00000559771 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 SAGE1Q9NXZ1 904 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 PITPNM2Q9BZ72 1349 aa7.45□□□□□ -1.22
USP3-215ENST00000559771 CACNA1FO60840 1977 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 LAMB1P07942 1786 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms