RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
LDLR-205ENST00000557933 CEP126Q9P2H0 1117 aa14.2□□□□□ -0.14
LDLR-205ENST00000557933 PPP2R2CQ9Y2T4 447 aa14.2□□□□□ -0.14
LDLR-205ENST00000557933 KDM6AO15550 1401 aaPredicted RBP14.2□□□□□ -0.14
LDLR-205ENST00000557933 ABL1P00519 1130 aa14.2□□□□□ -0.14
LDLR-205ENST00000557933 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
LDLR-205ENST00000557933 METAP2P50579 478 aaKnown RBP eCLIP14.2□□□□□ -0.145e-7■□□□□ 8.9
LDLR-205ENST00000557933 MYL5Q02045 173 aa14.2□□□□□ -0.14
LDLR-205ENST00000557933 RABL6Q3YEC7 729 aaPredicted RBP14.2□□□□□ -0.14
LDLR-205ENST00000557933 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
LDLR-205ENST00000557933 SOWAHDA6NJG2 315 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 BTBD18B2RXH4 712 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 SMIM22K7EJ46 135 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 NRDCO43847 1150 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 CASP7P55210 303 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 EYA2O00167 538 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 CTDSPL2Q05D32 466 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 GPIHBP1Q8IV16 184 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
LDLR-205ENST00000557933 PRDM11Q9NQV5 511 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 POLR3EQ9NVU0 708 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 NFE2L3Q9Y4A8 694 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 KAT6BQ8WYB5 2073 aa14.19□□□□□ -0.14
LDLR-205ENST00000557933 TADA3O75528 432 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 AFMP43652 599 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 NR5A1Q13285 461 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 AGXT2Q9BYV1 514 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 PLEKHA4Q9H4M7 779 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 MRPL44Q9H9J2 332 aaKnown RBP14.18□□□□□ -0.14
LDLR-205ENST00000557933 CWC25Q9NXE8 425 aaPredicted RBP14.18□□□□□ -0.14
LDLR-205ENST00000557933 A0A1W2PQ27 194 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 A0A1W2PQ64 194 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 A0A1W2PQD8 194 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 FAM205CA6NFA0 338 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 POLR2DO15514 142 aaKnown RBP14.18□□□□□ -0.14
LDLR-205ENST00000557933 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
LDLR-205ENST00000557933 IMPACTQ9P2X3 320 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 CCDC66A2RUB6 948 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 TEX33O43247 280 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 KRBA2Q6ZNG9 492 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 EEF2KMTQ96G04 330 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 BAG1Q99933 345 aaPredicted RBP14.18□□□□□ -0.14
LDLR-205ENST00000557933 TRIM34Q9BYJ4 488 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 KCNH3Q9ULD8 1083 aa14.18□□□□□ -0.14
LDLR-205ENST00000557933 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
LDLR-205ENST00000557933 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
LDLR-205ENST00000557933 TRIM66O15016 1216 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 RANBP6O60518 1105 aaKnown RBP14.17□□□□□ -0.14
LDLR-205ENST00000557933 TBC1D8O95759 1140 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 CMA1P23946 247 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 LMAN1P49257 510 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 PPP2R3AQ06190 1150 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 CCDC57Q2TAC2 916 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 OLFM4Q6UX06 510 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 CERS3Q8IU89 383 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 LCMT1Q9UIC8 334 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 SPATA31A6Q5VVP1 1343 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 A0A0G2JS52 829 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 N4BP1O75113 896 aaKnown RBP14.17□□□□□ -0.14
LDLR-205ENST00000557933 YEATS4O95619 227 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 RHOXF2BP0C7M4 288 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 CASQ1P31415 396 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 SLC39A14Q15043 492 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 NUP133Q8WUM0 1156 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 RHOXF2Q9BQY4 288 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 PARD6BQ9BYG5 372 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 SERTAD1Q9UHV2 236 aa14.17□□□□□ -0.14
LDLR-205ENST00000557933 IQSEC3Q9UPP2 1182 aaPredicted RBP14.17□□□□□ -0.14
LDLR-205ENST00000557933 CYP2C19P33261 490 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 IL15P40933 162 aaPredicted RBP14.16□□□□□ -0.14
LDLR-205ENST00000557933 TRDNQ13061 729 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 TFR2Q9UP52 801 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 CDC25AP30304 524 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 FAM53CQ9NYF3 392 aa14.16□□□□□ -0.14
LDLR-205ENST00000557933 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.14
LDLR-205ENST00000557933 SMC1AQ14683 1233 aaKnown RBP14.15□□□□□ -0.14
LDLR-205ENST00000557933 TMEM139Q8IV31 216 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 OXER1Q8TDS5 423 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 ARGLU1Q9NWB6 273 aaPredicted RBP14.15□□□□□ -0.14
LDLR-205ENST00000557933 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.15□□□□□ -0.14
LDLR-205ENST00000557933 H3BQF6 201 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 KIF2AO00139 706 aaPredicted RBP14.15□□□□□ -0.14
LDLR-205ENST00000557933 MCAMP43121 646 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 MED15Q96RN5 788 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 MAPK8IP1Q9UQF2 711 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
LDLR-205ENST00000557933 GOLGA8AA7E2F4 631 aa14.14□□□□□ -0.15
LDLR-205ENST00000557933 UBAP1LF5GYI3 381 aa14.14□□□□□ -0.15
LDLR-205ENST00000557933 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
LDLR-205ENST00000557933 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
LDLR-205ENST00000557933 CC2D1AQ6P1N0 951 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms