RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-217	ENST00000543449	DHX36	Q9H2U1	1008 aa	Known RBP	12.53	□□□□□ -0.4
NPIPB4-217	ENST00000543449	RFX7	Q2KHR2	1363 aa		12.53	□□□□□ -0.4
NPIPB4-217	ENST00000543449	MYH2	Q9UKX2	1941 aa		12.52	□□□□□ -0.4
NPIPB4-217	ENST00000543449	TBC1D12	O60347	775 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CYP2E1	P05181	493 aa	Predicted RBP	12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZAP70	P43403	619 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	RHBDL3	P58872	404 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	MAP3K10	Q02779	954 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	AAMP	Q13685	434 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ARHGEF6	Q15052	776 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CTU1	Q7Z7A3	348 aa	Known RBP	12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CDAN1	Q8IWY9	1227 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TEX11	Q8IYF3	940 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	OTUD5	Q96G74	571 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TBC1D2	Q9BYX2	928 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	LRRCC1	Q9C099	1032 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PICK1	Q9NRD5	415 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SNRK	Q9NRH2	765 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SNCAIP	Q9Y6H5	919 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ATRNL1	Q5VV63	1379 aa		12.52	□□□□□ -0.41
NPIPB4-217	ENST00000543449	GPR25	O00155	361 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CTNND1	O60716	968 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	FKTN	O75072	461 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	IDH1	O75874	414 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PICALM	Q13492	652 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DGKZ	Q13574	1117 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	MIGA2	Q7L4E1	593 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SIRT2	Q8IXJ6	389 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	IL1RAPL2	Q9NP60	686 aa		12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TLR7	Q9NYK1	1049 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	HERC5	Q9UII4	1024 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CCL15-CCL14	A0A0B4J2E2	113 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TBC1D8	O95759	1140 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	GJA5	P36382	358 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	RRP1	P56182	461 aa	Known RBP	12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CCL15	Q16663	113 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	C20orf194	Q5TEA3	1177 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SCYL3	Q8IZE3	742 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZNF384	Q8TF68	577 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZKSCAN4	Q969J2	545 aa	Predicted RBP	12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ABHD8	Q96I13	439 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	GPATCH3	Q96I76	525 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	MS4A4A	Q96JQ5	239 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	MCOLN1	Q9GZU1	580 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZFYVE28	Q9HCC9	887 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PI4KB	Q9UBF8	816 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	LAMB1	P07942	1786 aa		12.5	□□□□□ -0.41
NPIPB4-217	ENST00000543449	MAST2	Q6P0Q8	1798 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	APBB1	O00213	710 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CXCL11	O14625	94 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CYP7A1	P22680	504 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	INPP5B	P32019	993 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ERO1A	Q96HE7	468 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TRIM34	Q9BYJ4	488 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DDX4	Q9NQI0	724 aa	Known RBP	12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PIH1D3	Q9NQM4	214 aa	Known RBP	12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	GINM1	Q9NU53	330 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	KCNH4	Q9UQ05	1017 aa		12.49	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DDTL	A6NHG4	134 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	IRF6	O14896	467 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	HLA-DOA	P06340	250 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ATP5J	P18859	108 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TAF1C	Q15572	869 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	FASTKD5	Q7L8L6	764 aa	Known RBP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZFPM1	Q8IX07	1006 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	BRI3BP	Q8WY22	251 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DCTPP1	Q9H773	170 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TAOK2	Q9UL54	1235 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	OTOF	Q9HC10	1997 aa		12.48	□□□□□ -0.41
NPIPB4-217	ENST00000543449	AK9	Q5TCS8	1911 aa		12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PHF20L1	A8MW92	1017 aa		12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ZSCAN25	Q6NSZ9	544 aa		12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SH3BP5L	Q7L8J4	393 aa		12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	ANKRD23	Q86SG2	305 aa		12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	MAGEB6	Q8N7X4	407 aa		12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	YTHDC1	Q96MU7	727 aa	Known RBP	12.47	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DOCK2	Q92608	1830 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CAPN15	O75808	1086 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PTPRA	P18433	802 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	USP5	P45974	858 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CRHR2	Q13324	411 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	KIF22	Q14807	665 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	SLC9C2	Q5TAH2	1124 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TTC6	Q86TZ1	520 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	TGFBRAP1	Q8WUH2	860 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	DNAJC2	Q99543	621 aa	Known RBP	12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	PTPN18	Q99952	460 aa		12.46	□□□□□ -0.41
NPIPB4-217	ENST00000543449	AS3MT	Q9HBK9	375 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms