RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 PRMT6Q96LA8 375 aaPredicted RBP23.31■■□□□ 1.32
USP11-205ENST00000467378 SNRKQ9NRH2 765 aa23.31■■□□□ 1.32
USP11-205ENST00000467378 TTF2Q9UNY4 1162 aaKnown RBP23.31■■□□□ 1.32
USP11-205ENST00000467378 SPDYE2BA6NHP3 402 aa23.3■■□□□ 1.32
USP11-205ENST00000467378 SPDYE6P0CI01 402 aa23.3■■□□□ 1.32
USP11-205ENST00000467378 RBM5P52756 815 aaKnown RBP eCLIP23.3■■□□□ 1.32
USP11-205ENST00000467378 RASA3Q14644 834 aa23.3■■□□□ 1.32
USP11-205ENST00000467378 MS4A4AQ96JQ5 239 aa23.3■■□□□ 1.32
USP11-205ENST00000467378 SZT2Q5T011 3432 aa23.3■■□□□ 1.32
USP11-205ENST00000467378 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 CCL15-CCL14A0A0B4J2E2 113 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 ATP5JP18859 108 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 PRDX5P30044 214 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 ZAP70P43403 619 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 NUCB1Q02818 461 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 CCL15Q16663 113 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 ZGPATQ8N5A5 531 aaKnown RBP23.29■■□□□ 1.32
USP11-205ENST00000467378 BRI3BPQ8WY22 251 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 ZBTB47Q9UFB7 747 aaPredicted RBP23.29■■□□□ 1.32
USP11-205ENST00000467378 DOCK2Q92608 1830 aa23.29■■□□□ 1.32
USP11-205ENST00000467378 CYP2E1P05181 493 aaPredicted RBP23.28■■□□□ 1.32
USP11-205ENST00000467378 KIF22Q14807 665 aa23.28■■□□□ 1.32
USP11-205ENST00000467378 TBC1D9Q6ZT07 1266 aa23.28■■□□□ 1.32
USP11-205ENST00000467378 OTUD7AQ8TE49 926 aaPredicted RBP23.28■■□□□ 1.32
USP11-205ENST00000467378 MRIQ9BWK5 157 aa23.28■■□□□ 1.32
USP11-205ENST00000467378 ABCF2Q9UG63 623 aa23.28■■□□□ 1.32
USP11-205ENST00000467378 AOX1Q06278 1338 aa23.28■■□□□ 1.32
USP11-205ENST00000467378 SALL3Q9BXA9 1300 aa23.28■■□□□ 1.32
USP11-205ENST00000467378 LDHBP07195 334 aaKnown RBP23.27■■□□□ 1.32
USP11-205ENST00000467378 GTF2A2P52657 109 aa23.27■■□□□ 1.32
USP11-205ENST00000467378 HDLBPQ00341 1268 aaKnown RBP23.27■■□□□ 1.32
USP11-205ENST00000467378 CHD1LQ86WJ1 897 aa23.27■■□□□ 1.32
USP11-205ENST00000467378 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
USP11-205ENST00000467378 ECHDC1Q9NTX5 307 aa23.27■■□□□ 1.32
USP11-205ENST00000467378 NDUFB9Q9Y6M9 179 aa23.27■■□□□ 1.32
USP11-205ENST00000467378 WDHD1O75717 1129 aaPredicted RBP23.26■■□□□ 1.31
USP11-205ENST00000467378 SPTY2D1Q68D10 685 aaPredicted RBP23.26■■□□□ 1.31
USP11-205ENST00000467378 FAM43AQ8N2R8 423 aa23.26■■□□□ 1.31
USP11-205ENST00000467378 LNPKQ9C0E8 428 aa23.26■■□□□ 1.31
USP11-205ENST00000467378 ARHGAP39Q9C0H5 1083 aa23.26■■□□□ 1.31
USP11-205ENST00000467378 SERPINA10Q9UK55 444 aa23.26■■□□□ 1.31
USP11-205ENST00000467378 CRKP46108 304 aa23.25■■□□□ 1.31
USP11-205ENST00000467378 ERICH6Q7L0X2 663 aa23.25■■□□□ 1.31
USP11-205ENST00000467378 BOLA2Q9H3K6 86 aa23.25■■□□□ 1.31
USP11-205ENST00000467378 MAST3O60307 1309 aa23.25■■□□□ 1.31
USP11-205ENST00000467378 TNFAIP1Q13829 316 aa23.24■■□□□ 1.31
USP11-205ENST00000467378 ERICH6BQ5W0A0 696 aa23.24■■□□□ 1.31
USP11-205ENST00000467378 HHIPL2Q6UWX4 724 aa23.24■■□□□ 1.31
USP11-205ENST00000467378 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.24■■□□□ 1.31
USP11-205ENST00000467378 ANTXR1Q9H6X2 564 aa23.24■■□□□ 1.31
USP11-205ENST00000467378 PIH1D3Q9NQM4 214 aaKnown RBP23.24■■□□□ 1.31
USP11-205ENST00000467378 TTC41PQ6P2S7 1318 aa23.24■■□□□ 1.31
USP11-205ENST00000467378 MAST2Q6P0Q8 1798 aa23.24■■□□□ 1.31
USP11-205ENST00000467378 ECM2O94769 699 aaPredicted RBP23.23■■□□□ 1.31
USP11-205ENST00000467378 ZNF384Q8TF68 577 aa23.23■■□□□ 1.31
USP11-205ENST00000467378 GPATCH3Q96I76 525 aa23.23■■□□□ 1.31
USP11-205ENST00000467378 HAUS7Q99871 368 aa23.23■■□□□ 1.31
USP11-205ENST00000467378 MX1P20591 662 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 LACTBP83111 547 aaPredicted RBP23.22■■□□□ 1.31
USP11-205ENST00000467378 VGLL4Q14135 290 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 MTFR1Q15390 333 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 TSHZ3Q63HK5 1081 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 TEKT1Q969V4 418 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 NSUN4Q96CB9 384 aaKnown RBP23.22■■□□□ 1.31
USP11-205ENST00000467378 SHISA4Q96DD7 197 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 LRP2BPQ9P2M1 347 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 STAP2Q9UGK3 403 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 CSADQ9Y600 493 aa23.22■■□□□ 1.31
USP11-205ENST00000467378 MYH7P12883 1935 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 TLR2O60603 784 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 IGSF3O75054 1194 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 MAP3K9P80192 1104 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 MECOMQ03112 1051 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 DIXDC1Q155Q3 683 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 PI4K2BQ8TCG2 481 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 ZDHHC15Q96MV8 337 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 DNAJC2Q99543 621 aaKnown RBP23.21■■□□□ 1.31
USP11-205ENST00000467378 HTATIP2Q9BUP3 242 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 RAI14Q9P0K7 980 aa23.21■■□□□ 1.31
USP11-205ENST00000467378 ZNF70Q9UC06 446 aaPredicted RBP23.21■■□□□ 1.31
USP11-205ENST00000467378 GNRH1P01148 92 aa23.2■■□□□ 1.3
USP11-205ENST00000467378 PRMT2P55345 433 aa23.2■■□□□ 1.3
USP11-205ENST00000467378 SPDYE2Q495Y8 402 aa23.2■■□□□ 1.3
USP11-205ENST00000467378 DZIP1Q86YF9 867 aaKnown RBP23.2■■□□□ 1.3
USP11-205ENST00000467378 CDAN1Q8IWY9 1227 aa23.2■■□□□ 1.3
USP11-205ENST00000467378 EDC3Q96F86 508 aaKnown RBP23.2■■□□□ 1.3
USP11-205ENST00000467378 FAM163AQ96GL9 167 aaPredicted RBP23.2■■□□□ 1.3
USP11-205ENST00000467378 GOLIM4O00461 696 aa23.19■■□□□ 1.3
USP11-205ENST00000467378 PDE1AP54750 535 aa23.19■■□□□ 1.3
USP11-205ENST00000467378 TTF1Q15361 905 aaPredicted RBP23.19■■□□□ 1.3
USP11-205ENST00000467378 NKX2-3Q8TAU0 364 aa23.19■■□□□ 1.3
USP11-205ENST00000467378 TDRD3Q9H7E2 651 aaKnown RBP23.19■■□□□ 1.3
USP11-205ENST00000467378 PAG1Q9NWQ8 432 aa23.19■■□□□ 1.3
USP11-205ENST00000467378 DAGLAQ9Y4D2 1042 aa23.19■■□□□ 1.3
USP11-205ENST00000467378 GAKO14976 1311 aa23.18■■□□□ 1.3
USP11-205ENST00000467378 TCP10L2B9ZVM9 353 aa23.18■■□□□ 1.3
USP11-205ENST00000467378 ERC2O15083 957 aa23.18■■□□□ 1.3
USP11-205ENST00000467378 APOBEC3HQ6NTF7 200 aaKnown RBP23.18■■□□□ 1.3
USP11-205ENST00000467378 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
USP11-205ENST00000467378 PLEKHM2Q8IWE5 1019 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms