RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
UBR4-211ENST00000467272 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
UBR4-211ENST00000467272 HTATIP2Q9BUP3 242 aa15.28■□□□□ 0.04
UBR4-211ENST00000467272 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
UBR4-211ENST00000467272 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
UBR4-211ENST00000467272 SEMA3EO15041 775 aa15.27■□□□□ 0.04
UBR4-211ENST00000467272 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
UBR4-211ENST00000467272 FARP2O94887 1054 aaPredicted RBP15.27■□□□□ 0.04
UBR4-211ENST00000467272 FLT3LGP49771 235 aa15.27■□□□□ 0.04
UBR4-211ENST00000467272 UBXN2AP68543 259 aa15.27■□□□□ 0.04
UBR4-211ENST00000467272 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.04
UBR4-211ENST00000467272 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
UBR4-211ENST00000467272 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.04
UBR4-211ENST00000467272 PDS5AQ29RF7 1337 aaKnown RBP15.26■□□□□ 0.03
UBR4-211ENST00000467272 SOX1O00570 391 aaPredicted RBP15.26■□□□□ 0.03
UBR4-211ENST00000467272 ADCY3O60266 1144 aa15.26■□□□□ 0.03
UBR4-211ENST00000467272 LDHBP07195 334 aaKnown RBP15.26■□□□□ 0.03
UBR4-211ENST00000467272 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
UBR4-211ENST00000467272 RGS3P49796 1198 aa15.26■□□□□ 0.03
UBR4-211ENST00000467272 DDTLA6NHG4 134 aaPredicted RBP15.25■□□□□ 0.03
UBR4-211ENST00000467272 INHAP05111 366 aa15.25■□□□□ 0.03
UBR4-211ENST00000467272 ELNP15502 786 aa15.25■□□□□ 0.03
UBR4-211ENST00000467272 ZNF384Q8TF68 577 aa15.25■□□□□ 0.03
UBR4-211ENST00000467272 DDX4Q9NQI0 724 aaKnown RBP15.25■□□□□ 0.03
UBR4-211ENST00000467272 NR2E3Q9Y5X4 410 aa15.25■□□□□ 0.03
UBR4-211ENST00000467272 UNC80Q8N2C7 3258 aa15.25■□□□□ 0.03
UBR4-211ENST00000467272 LAMA2P24043 3122 aaKnown RBP15.25■□□□□ 0.03
UBR4-211ENST00000467272 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
UBR4-211ENST00000467272 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
UBR4-211ENST00000467272 NPM3O75607 178 aaKnown RBP15.24■□□□□ 0.03
UBR4-211ENST00000467272 PHKA1P46020 1223 aa15.24■□□□□ 0.03
UBR4-211ENST00000467272 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
UBR4-211ENST00000467272 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
UBR4-211ENST00000467272 DENND2AQ9ULE3 1009 aa15.24■□□□□ 0.03
UBR4-211ENST00000467272 MGAMO43451 1857 aa15.24■□□□□ 0.03
UBR4-211ENST00000467272 TBC1D12O60347 775 aa15.23■□□□□ 0.03
UBR4-211ENST00000467272 RHBDL3P58872 404 aa15.23■□□□□ 0.03
UBR4-211ENST00000467272 AGTPBP1Q9UPW5 1226 aa15.23■□□□□ 0.03
UBR4-211ENST00000467272 PTPRFP10586 1907 aa15.23■□□□□ 0.03
UBR4-211ENST00000467272 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 CCDC102BQ68D86 513 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 DEFB118Q96PH6 123 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 GDF15Q99988 308 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 PICK1Q9NRD5 415 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
UBR4-211ENST00000467272 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.22■□□□□ 0.03
UBR4-211ENST00000467272 BIN2Q9UBW5 565 aaPredicted RBP15.22■□□□□ 0.03
UBR4-211ENST00000467272 GJD2Q9UKL4 321 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 DOCK2Q92608 1830 aa15.22■□□□□ 0.03
UBR4-211ENST00000467272 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
UBR4-211ENST00000467272 ADORA1P30542 326 aa15.21■□□□□ 0.03
UBR4-211ENST00000467272 BMP8BP34820 402 aa15.21■□□□□ 0.03
UBR4-211ENST00000467272 IL15P40933 162 aaPredicted RBP15.21■□□□□ 0.03
UBR4-211ENST00000467272 FAM110CQ1W6H9 321 aa15.21■□□□□ 0.03
UBR4-211ENST00000467272 CEP126Q9P2H0 1117 aa15.21■□□□□ 0.03
UBR4-211ENST00000467272 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
UBR4-211ENST00000467272 MYH13Q9UKX3 1938 aa15.2■□□□□ 0.02
UBR4-211ENST00000467272 TNPO2O14787 897 aaKnown RBP15.2■□□□□ 0.02
UBR4-211ENST00000467272 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
UBR4-211ENST00000467272 GPR153Q6NV75 609 aa15.2■□□□□ 0.02
UBR4-211ENST00000467272 TRMT2AQ8IZ69 625 aaKnown RBP15.2■□□□□ 0.02
UBR4-211ENST00000467272 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
UBR4-211ENST00000467272 DIS3LQ8TF46 1054 aaKnown RBP15.2■□□□□ 0.02
UBR4-211ENST00000467272 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
UBR4-211ENST00000467272 DOCK1Q14185 1865 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 TRIM75PA6NK02 468 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 EVI5O60447 810 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 TFRCP02786 760 aaKnown RBP15.19■□□□□ 0.02
UBR4-211ENST00000467272 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
UBR4-211ENST00000467272 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 CCDC84Q86UT8 332 aaPredicted RBP15.19■□□□□ 0.02
UBR4-211ENST00000467272 ZGPATQ8N5A5 531 aaKnown RBP15.19■□□□□ 0.02
UBR4-211ENST00000467272 ANKLE1Q8NAG6 615 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 LRCH3Q96II8 777 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 PAWRQ96IZ0 340 aaKnown RBP15.19■□□□□ 0.02
UBR4-211ENST00000467272 SIL1Q9H173 461 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 STAP2Q9UGK3 403 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 ALPK3Q96L96 1907 aa15.19■□□□□ 0.02
UBR4-211ENST00000467272 MROH7-TTC4A0A0A0MT08 1334 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 DNAH12Q6ZR08 3092 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 E9PSI1 815 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
UBR4-211ENST00000467272 BTDP43251 543 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 SH3D19Q5HYK7 790 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.02
UBR4-211ENST00000467272 PA2G4Q9UQ80 394 aaKnown RBP15.18■□□□□ 0.02
UBR4-211ENST00000467272 LRRFIP2Q9Y608 721 aaKnown RBP15.18■□□□□ 0.02
UBR4-211ENST00000467272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.18■□□□□ 0.02
UBR4-211ENST00000467272 VCANP13611 3396 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 LOC285556D6RIA3 1793 aa15.18■□□□□ 0.02
UBR4-211ENST00000467272 ANP32CO43423 234 aa15.17■□□□□ 0.02
UBR4-211ENST00000467272 MAP4K4O95819 1239 aaPredicted RBP15.17■□□□□ 0.02
UBR4-211ENST00000467272 TIMM10P62072 90 aa15.17■□□□□ 0.02
UBR4-211ENST00000467272 MECOMQ03112 1051 aa15.17■□□□□ 0.02
UBR4-211ENST00000467272 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms