RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 USP40Q9NVE5 1235 aa24.93■■□□□ 1.58
CHRD-207ENST00000459711 CUL9Q8IWT3 2517 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 ALPK3Q96L96 1907 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 DOCK3Q8IZD9 2030 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 TFRCP02786 760 aaKnown RBP24.92■■□□□ 1.58
CHRD-207ENST00000459711 PTPRAP18433 802 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 ZFPM1Q8IX07 1006 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 LRCH3Q96II8 777 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 DEFB118Q96PH6 123 aa24.92■■□□□ 1.58
CHRD-207ENST00000459711 PAK6Q9NQU5 681 aaPredicted RBP24.92■■□□□ 1.58
CHRD-207ENST00000459711 EYA2O00167 538 aa24.91■■□□□ 1.58
CHRD-207ENST00000459711 TNPO2O14787 897 aaKnown RBP24.91■■□□□ 1.58
CHRD-207ENST00000459711 PICK1Q9NRD5 415 aa24.91■■□□□ 1.58
CHRD-207ENST00000459711 AFG3L2Q9Y4W6 797 aa24.91■■□□□ 1.58
CHRD-207ENST00000459711 LDHBP07195 334 aaKnown RBP24.9■■□□□ 1.58
CHRD-207ENST00000459711 GADL1Q6ZQY3 521 aa24.9■■□□□ 1.58
CHRD-207ENST00000459711 CRISPLD2Q9H0B8 497 aa24.9■■□□□ 1.58
CHRD-207ENST00000459711 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
CHRD-207ENST00000459711 STAP2Q9UGK3 403 aa24.9■■□□□ 1.58
CHRD-207ENST00000459711 RFX5P48382 616 aaPredicted RBP24.89■■□□□ 1.58
CHRD-207ENST00000459711 IDI2Q9BXS1 227 aa24.89■■□□□ 1.58
CHRD-207ENST00000459711 PHIPQ8WWQ0 1821 aa24.89■■□□□ 1.57
CHRD-207ENST00000459711 SALL1Q9NSC2 1324 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 DOCK1Q14185 1865 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 ENTPD3O75355 529 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 RGS3P49796 1198 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 MAP3K10Q02779 954 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 SMCR8Q8TEV9 937 aaPredicted RBP24.88■■□□□ 1.57
CHRD-207ENST00000459711 PAWRQ96IZ0 340 aaKnown RBP24.88■■□□□ 1.57
CHRD-207ENST00000459711 USP44Q9H0E7 712 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 RFX7Q2KHR2 1363 aa24.88■■□□□ 1.57
CHRD-207ENST00000459711 MYH2Q9UKX2 1941 aa24.87■■□□□ 1.57
CHRD-207ENST00000459711 ATG9AQ7Z3C6 839 aa24.87■■□□□ 1.57
CHRD-207ENST00000459711 SH3BP5LQ7L8J4 393 aa24.86■■□□□ 1.57
CHRD-207ENST00000459711 MRPL50Q8N5N7 158 aaKnown RBP24.86■■□□□ 1.57
CHRD-207ENST00000459711 NECAB2Q7Z6G3 386 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 COA7Q96BR5 231 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 GDF15Q99988 308 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 GNL3LQ9NVN8 582 aaKnown RBP24.85■■□□□ 1.57
CHRD-207ENST00000459711 TAOK2Q9UL54 1235 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 AGTPBP1Q9UPW5 1226 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 LRRFIP2Q9Y608 721 aaKnown RBP24.85■■□□□ 1.57
CHRD-207ENST00000459711 GAKO14976 1311 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 PTPRCP08575 1304 aa24.85■■□□□ 1.57
CHRD-207ENST00000459711 CTNND1O60716 968 aaKnown RBP24.84■■□□□ 1.57
CHRD-207ENST00000459711 BMP8BP34820 402 aa24.84■■□□□ 1.57
CHRD-207ENST00000459711 DIS3LQ8TF46 1054 aaKnown RBP24.84■■□□□ 1.57
CHRD-207ENST00000459711 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.84■■□□□ 1.575e-6■■■□□ 18
CHRD-207ENST00000459711 DENND2AQ9ULE3 1009 aa24.84■■□□□ 1.57
CHRD-207ENST00000459711 TRIM75PA6NK02 468 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 SEMA3EO15041 775 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 ATP2B3Q16720 1220 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 FAM110CQ1W6H9 321 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 GPR153Q6NV75 609 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 ZSCAN29Q8IWY8 852 aaPredicted RBP24.83■■□□□ 1.57
CHRD-207ENST00000459711 ANKRD13CQ8N6S4 541 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 ANKLE1Q8NAG6 615 aa24.83■■□□□ 1.57
CHRD-207ENST00000459711 DDTLA6NHG4 134 aaPredicted RBP24.82■■□□□ 1.56
CHRD-207ENST00000459711 ZBTB22O15209 634 aa24.82■■□□□ 1.56
CHRD-207ENST00000459711 SLURP2P0DP57 97 aa24.82■■□□□ 1.56
CHRD-207ENST00000459711 MNX1P50219 401 aaPredicted RBP24.82■■□□□ 1.56
CHRD-207ENST00000459711 FBXO3Q9UK99 471 aa24.82■■□□□ 1.56
CHRD-207ENST00000459711 PHKA1P46020 1223 aa24.81■■□□□ 1.56
CHRD-207ENST00000459711 DDX4Q9NQI0 724 aaKnown RBP24.81■■□□□ 1.56
CHRD-207ENST00000459711 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.81■■□□□ 1.56
CHRD-207ENST00000459711 PNMA3Q9UL41 463 aa24.81■■□□□ 1.56
CHRD-207ENST00000459711 TREML2Q5T2D2 321 aa24.8■■□□□ 1.56
CHRD-207ENST00000459711 CCDC84Q86UT8 332 aaPredicted RBP24.8■■□□□ 1.56
CHRD-207ENST00000459711 C7orf61Q8IZ16 206 aa24.8■■□□□ 1.56
CHRD-207ENST00000459711 ZGPATQ8N5A5 531 aaKnown RBP24.8■■□□□ 1.56
CHRD-207ENST00000459711 CEP126Q9P2H0 1117 aa24.8■■□□□ 1.56
CHRD-207ENST00000459711 CIAO1O76071 339 aa24.79■■□□□ 1.56
CHRD-207ENST00000459711 HMGCRP04035 888 aa24.79■■□□□ 1.56
CHRD-207ENST00000459711 SIL1Q9H173 461 aa24.79■■□□□ 1.56
CHRD-207ENST00000459711 ZMYND8Q9ULU4 1186 aaPredicted RBP24.79■■□□□ 1.56
CHRD-207ENST00000459711 LOC285556D6RIA3 1793 aa24.78■■□□□ 1.56
CHRD-207ENST00000459711 PROCA1Q8NCQ7 364 aaPredicted RBP24.78■■□□□ 1.56
CHRD-207ENST00000459711 FAM163AQ96GL9 167 aaPredicted RBP24.78■■□□□ 1.56
CHRD-207ENST00000459711 PICALMQ13492 652 aa24.77■■□□□ 1.56
CHRD-207ENST00000459711 DZIP1Q86YF9 867 aaKnown RBP24.77■■□□□ 1.56
CHRD-207ENST00000459711 DEFB123Q8N688 67 aa24.77■■□□□ 1.56
CHRD-207ENST00000459711 NBPF3Q9H094 633 aa24.77■■□□□ 1.56
CHRD-207ENST00000459711 DDX60LQ5H9U9 1706 aaKnown RBP24.76■■□□□ 1.55
CHRD-207ENST00000459711 TBC1D12O60347 775 aa24.76■■□□□ 1.55
CHRD-207ENST00000459711 BTDP43251 543 aa24.76■■□□□ 1.55
CHRD-207ENST00000459711 GCLCP48506 637 aaPredicted RBP24.76■■□□□ 1.55
CHRD-207ENST00000459711 LRIT3Q3SXY7 679 aa24.76■■□□□ 1.55
CHRD-207ENST00000459711 SLF2Q8IX21 1173 aa24.76■■□□□ 1.55
CHRD-207ENST00000459711 GJD2Q9UKL4 321 aa24.76■■□□□ 1.55
CHRD-207ENST00000459711 RPTORQ8N122 1335 aa24.76■■□□□ 1.55
CHRD-207ENST00000459711 CCDC102BQ68D86 513 aa24.75■■□□□ 1.55
CHRD-207ENST00000459711 HMX1Q9NP08 348 aaPredicted RBP24.75■■□□□ 1.55
CHRD-207ENST00000459711 PDS5AQ29RF7 1337 aaKnown RBP24.75■■□□□ 1.55
CHRD-207ENST00000459711 ZNF521Q96K83 1311 aa24.75■■□□□ 1.55
CHRD-207ENST00000459711 ADORA1P30542 326 aa24.74■■□□□ 1.55
CHRD-207ENST00000459711 TRIM32Q13049 653 aa24.74■■□□□ 1.55
CHRD-207ENST00000459711 RASGRF1Q13972 1273 aa24.74■■□□□ 1.55
CHRD-207ENST00000459711 Q7L0L9 218 aa24.74■■□□□ 1.55
CHRD-207ENST00000459711 SSH1Q8WYL5 1049 aa24.74■■□□□ 1.55
CHRD-207ENST00000459711 OSBPL5Q9H0X9 879 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms