RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 VEGFBP49765 207 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-211ENST00000443563 PRKG1Q13976 671 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 TICAM2Q86XR7 235 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 OTUD7AQ8TE49 926 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-211ENST00000443563 CAPNS2Q96L46 248 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-211ENST00000443563 USP5P45974 858 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 CYP4F22Q6NT55 531 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.32
HDAC6-211ENST00000443563 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-211ENST00000443563 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
HDAC6-211ENST00000443563 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
HDAC6-211ENST00000443563 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
HDAC6-211ENST00000443563 MYH1P12882 1939 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 THSD7BQ9C0I4 1608 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 MAP2K2P36507 400 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
HDAC6-211ENST00000443563 NOGQ13253 232 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 MOB2Q70IA6 237 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 JMYQ8N9B5 988 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 SLC10A4Q96EP9 437 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 FSD1Q9BTV5 496 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
HDAC6-211ENST00000443563 NAV1Q8NEY1 1877 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 RNF113AO15541 343 aaKnown RBP13.06□□□□□ -0.32
HDAC6-211ENST00000443563 SLC10A3P09131 477 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 GRM1Q13255 1194 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-211ENST00000443563 PLEKHM2Q8IWE5 1019 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-211ENST00000443563 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 RIOK1Q9BRS2 568 aaKnown RBP13.06□□□□□ -0.32
HDAC6-211ENST00000443563 CSADQ9Y600 493 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 FLT1P17948 1338 aa13.06□□□□□ -0.32
HDAC6-211ENST00000443563 TBC1D12O60347 775 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-211ENST00000443563 APPBP2Q92624 585 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
HDAC6-211ENST00000443563 DDTLA6NHG4 134 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-211ENST00000443563 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 MBD4O95243 580 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 MAP2K1Q02750 393 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-211ENST00000443563 MAP3K10Q02779 954 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 RASAL3Q86YV0 1011 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 HERC5Q9UII4 1024 aaKnown RBP13.04□□□□□ -0.32
HDAC6-211ENST00000443563 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 LAMB1P07942 1786 aa13.04□□□□□ -0.32
HDAC6-211ENST00000443563 DDX60LQ5H9U9 1706 aaKnown RBP13.03□□□□□ -0.32
HDAC6-211ENST00000443563 FAM155AB1AL88 458 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-211ENST00000443563 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-211ENST00000443563 GNAT2P19087 354 aa13.03□□□□□ -0.32
HDAC6-211ENST00000443563 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
HDAC6-211ENST00000443563 FOXP4Q8IVH2 680 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-211ENST00000443563 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
HDAC6-211ENST00000443563 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
HDAC6-211ENST00000443563 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-211ENST00000443563 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
HDAC6-211ENST00000443563 ARMT1Q9H993 441 aa13.03□□□□□ -0.32
HDAC6-211ENST00000443563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC6-211ENST00000443563 AOC2O75106 756 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 VGLL4Q14135 290 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-211ENST00000443563 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
HDAC6-211ENST00000443563 ELP3Q9H9T3 547 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
HDAC6-211ENST00000443563 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 SIPA1L1O43166 1804 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 DOCK1Q14185 1865 aa13.02□□□□□ -0.33
HDAC6-211ENST00000443563 HIP1O00291 1037 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 CTNND1O60716 968 aaKnown RBP13.01□□□□□ -0.33
HDAC6-211ENST00000443563 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms