RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 GTF2IP78347 998 aa22.06■■□□□ 1.12
POLR1E-203ENST00000442009 SKOR2Q2VWA4 1001 aaPredicted RBP22.06■■□□□ 1.12
POLR1E-203ENST00000442009 EYA3Q99504 573 aa22.06■■□□□ 1.12
POLR1E-203ENST00000442009 SENP2Q9HC62 589 aa22.06■■□□□ 1.12
POLR1E-203ENST00000442009 GAKO14976 1311 aa22.05■■□□□ 1.12
POLR1E-203ENST00000442009 CYP2D7A0A087X1C5 515 aa22.05■■□□□ 1.12
POLR1E-203ENST00000442009 BAG3O95817 575 aa22.05■■□□□ 1.12
POLR1E-203ENST00000442009 CERS3Q8IU89 383 aa22.05■■□□□ 1.12
POLR1E-203ENST00000442009 KIF13BQ9NQT8 1826 aa22.05■■□□□ 1.12
POLR1E-203ENST00000442009 HMGN5P82970 282 aaKnown RBP22.04■■□□□ 1.12
POLR1E-203ENST00000442009 SH3RF3Q8TEJ3 882 aaPredicted RBP22.04■■□□□ 1.12
POLR1E-203ENST00000442009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.04■■□□□ 1.12
POLR1E-203ENST00000442009 APOA5Q6Q788 366 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 ARPP21Q9UBL0 812 aaPredicted RBP22.03■■□□□ 1.12
POLR1E-203ENST00000442009 PTPDC1A2A3K4 754 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 GOLGA8BA8MQT2 603 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 TMEM67Q5HYA8 995 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 CC2D2BQ6DHV5 1058 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 PODNQ7Z5L7 613 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 CERS5Q8N5B7 392 aa22.03■■□□□ 1.12
POLR1E-203ENST00000442009 ZNF646O15015 1829 aaPredicted RBP22.02■■□□□ 1.12
POLR1E-203ENST00000442009 ORC4O43929 436 aa22.02■■□□□ 1.12
POLR1E-203ENST00000442009 FDPSP14324 419 aaKnown RBP22.02■■□□□ 1.12
POLR1E-203ENST00000442009 GSE1Q14687 1217 aa22.02■■□□□ 1.12
POLR1E-203ENST00000442009 DOK7Q18PE1 504 aa22.02■■□□□ 1.12
POLR1E-203ENST00000442009 IFIT3O14879 490 aaKnown RBP22.01■■□□□ 1.11
POLR1E-203ENST00000442009 DHX16O60231 1041 aaKnown RBP22.01■■□□□ 1.11
POLR1E-203ENST00000442009 EVX2Q03828 476 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 CDC37L1Q7L3B6 337 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 SLF2Q8IX21 1173 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 ESR2Q92731 530 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 DDX11Q96FC9 970 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 NAP1L2Q9ULW6 460 aaPredicted RBP22.01■■□□□ 1.11
POLR1E-203ENST00000442009 KCNA3P22001 575 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 RHBDL3P58872 404 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 SEC23AQ15436 765 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 RRP12Q5JTH9 1297 aaKnown RBP22.01■■□□□ 1.11
POLR1E-203ENST00000442009 C12orf60Q5U649 245 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 ATP6V1DQ9Y5K8 247 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 NID2Q14112 1375 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 SCN9AQ15858 1988 aa22.01■■□□□ 1.11
POLR1E-203ENST00000442009 VPS37CA5D8V6 355 aaPredicted RBP22■■□□□ 1.11
POLR1E-203ENST00000442009 PRPF40AO75400 957 aaKnown RBP22■■□□□ 1.11
POLR1E-203ENST00000442009 CYP2D6P10635 497 aa22■■□□□ 1.11
POLR1E-203ENST00000442009 BTDP43251 543 aa22■■□□□ 1.11
POLR1E-203ENST00000442009 FOCADQ5VW36 1801 aa22■■□□□ 1.11
POLR1E-203ENST00000442009 NAV1Q8NEY1 1877 aa22■■□□□ 1.11
POLR1E-203ENST00000442009 KLHL40Q2TBA0 621 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 STK11IPQ8N1F8 1099 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 TMTC2Q8N394 836 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 TMEM87AQ8NBN3 555 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 NOL10Q9BSC4 688 aaKnown RBP21.99■■□□□ 1.11
POLR1E-203ENST00000442009 FAM217BQ9NTX9 383 aaPredicted RBP21.99■■□□□ 1.11
POLR1E-203ENST00000442009 MCM9Q9NXL9 1143 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 DDX60LQ5H9U9 1706 aaKnown RBP21.99■■□□□ 1.11
POLR1E-203ENST00000442009 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 USP17L8P0C7I0 530 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 PLCG2P16885 1265 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 SART3Q15020 963 aaKnown RBP21.99■■□□□ 1.11
POLR1E-203ENST00000442009 TOMM22Q9NS69 142 aa21.99■■□□□ 1.11
POLR1E-203ENST00000442009 ZBTB43O43298 467 aa21.98■■□□□ 1.11
POLR1E-203ENST00000442009 USP5P45974 858 aa21.98■■□□□ 1.11
POLR1E-203ENST00000442009 FKBP1AP62942 108 aaKnown RBP21.98■■□□□ 1.11
POLR1E-203ENST00000442009 FAM184AQ8NB25 1140 aa21.98■■□□□ 1.11
POLR1E-203ENST00000442009 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
POLR1E-203ENST00000442009 DAGLAQ9Y4D2 1042 aa21.98■■□□□ 1.11
POLR1E-203ENST00000442009 NT5C2P49902 561 aa21.97■■□□□ 1.11
POLR1E-203ENST00000442009 RCAN1P53805 252 aa21.97■■□□□ 1.11
POLR1E-203ENST00000442009 NTRK3Q16288 839 aa21.97■■□□□ 1.11
POLR1E-203ENST00000442009 GRIPAP1Q4V328 841 aa21.97■■□□□ 1.11
POLR1E-203ENST00000442009 TGFBRAP1Q8WUH2 860 aa21.97■■□□□ 1.11
POLR1E-203ENST00000442009 ZKSCAN3Q9BRR0 538 aa21.97■■□□□ 1.11
POLR1E-203ENST00000442009 CDC27P30260 824 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 ADD1P35611 737 aaKnown RBP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 METAP2P50579 478 aaKnown RBP eCLIP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 KIAA2012Q0VF49 1180 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 WTAPQ15007 396 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 RAB11FIP4Q86YS3 637 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 TTLL6Q8N841 843 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 RGS22Q8NE09 1264 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 DBNDD1Q9H9R9 158 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 KCNQ5Q9NR82 932 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 SLC12A7Q9Y666 1083 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 PRDM1O75626 825 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 SLC3A2P08195 630 aaKnown RBP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 FOXD4L6Q3SYB3 417 aaPredicted RBP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 STRIP1Q5VSL9 837 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 FOXD4L3Q6VB84 417 aaPredicted RBP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 ZSCAN10Q96SZ4 725 aaPredicted RBP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 MXD3Q9BW11 206 aa21.96■■□□□ 1.11
POLR1E-203ENST00000442009 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
POLR1E-203ENST00000442009 DPEP1P16444 411 aa21.95■■□□□ 1.1
POLR1E-203ENST00000442009 NFXL1Q6ZNB6 911 aa21.95■■□□□ 1.1
POLR1E-203ENST00000442009 ENAHQ8N8S7 591 aaPredicted RBP21.95■■□□□ 1.1
POLR1E-203ENST00000442009 GPT2Q8TD30 523 aa21.95■■□□□ 1.1
POLR1E-203ENST00000442009 UBAC1Q9BSL1 405 aa21.95■■□□□ 1.1
POLR1E-203ENST00000442009 MRIQ9BWK5 157 aa21.95■■□□□ 1.1
POLR1E-203ENST00000442009 CNPY2Q9Y2B0 182 aa21.95■■□□□ 1.1
POLR1E-203ENST00000442009 DDX49Q9Y6V7 483 aaKnown RBP21.95■■□□□ 1.1
POLR1E-203ENST00000442009 TNKSO95271 1327 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms