RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 MCAMP43121 646 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 SP3Q02447 781 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 PPATQ06203 517 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 PPIL2Q13356 520 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 FBXO46Q6PJ61 603 aaPredicted RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 NSUN4Q96CB9 384 aaKnown RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 ERO1AQ96HE7 468 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 NOL10Q9BSC4 688 aaKnown RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 DDX4Q9NQI0 724 aaKnown RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 ZNF112Q9UJU3 913 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
NUP50-206ENST00000422489 APBB1O00213 710 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
NUP50-206ENST00000422489 SLURP2P0DP57 97 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 RGS19P49795 217 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 CEP85Q6P2H3 762 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
NUP50-206ENST00000422489 SH3BP5LQ7L8J4 393 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
NUP50-206ENST00000422489 ZNF384Q8TF68 577 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 PICK1Q9NRD5 415 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 EXOC6BQ9Y2D4 811 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
NUP50-206ENST00000422489 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 BAG3O95817 575 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 ZAP70P43403 619 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 RHBDL3P58872 404 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 NAA16Q6N069 864 aaPredicted RBP11.38□□□□□ -0.59
NUP50-206ENST00000422489 OTOP1Q7RTM1 612 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 TEX11Q8IYF3 940 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 EAF2Q96CJ1 260 aaPredicted RBP11.38□□□□□ -0.59
NUP50-206ENST00000422489 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 ZHX2Q9Y6X8 837 aa11.38□□□□□ -0.59
NUP50-206ENST00000422489 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
NUP50-206ENST00000422489 PHF20L1A8MW92 1017 aa11.37□□□□□ -0.59
NUP50-206ENST00000422489 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
NUP50-206ENST00000422489 DSG3P32926 999 aa11.37□□□□□ -0.59
NUP50-206ENST00000422489 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
NUP50-206ENST00000422489 AACSQ86V21 672 aa11.37□□□□□ -0.59
NUP50-206ENST00000422489 SH3RF3Q8TEJ3 882 aaPredicted RBP11.37□□□□□ -0.59
NUP50-206ENST00000422489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
NUP50-206ENST00000422489 IL1RAPL2Q9NP60 686 aa11.37□□□□□ -0.59
NUP50-206ENST00000422489 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
NUP50-206ENST00000422489 TLR7Q9NYK1 1049 aaKnown RBP11.37□□□□□ -0.59
NUP50-206ENST00000422489 DBNLQ9UJU6 430 aaKnown RBP11.37□□□□□ -0.59
NUP50-206ENST00000422489 FAM196BA6NMK8 535 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 PDHXO00330 501 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
NUP50-206ENST00000422489 KIF22Q14807 665 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
NUP50-206ENST00000422489 GADL1Q6ZQY3 521 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 ERC1Q8IUD2 1116 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 SCYL3Q8IZE3 742 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 PIH1D3Q9NQM4 214 aaKnown RBP11.36□□□□□ -0.59
NUP50-206ENST00000422489 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 PTPN22Q9Y2R2 807 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 AKAP11Q9UKA4 1901 aa11.36□□□□□ -0.59
NUP50-206ENST00000422489 CXCL11O14625 94 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 TLR2O60603 784 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
NUP50-206ENST00000422489 PTPRAP18433 802 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 CYP7A1P22680 504 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 DYNLL1P63167 89 aaKnown RBP11.35□□□□□ -0.59
NUP50-206ENST00000422489 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 MAPKAPK5Q8IW41 473 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 RPAP2Q8IXW5 612 aaPredicted RBP11.35□□□□□ -0.59
NUP50-206ENST00000422489 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
NUP50-206ENST00000422489 OSBPL5Q9H0X9 879 aaPredicted RBP11.35□□□□□ -0.59
NUP50-206ENST00000422489 CHMP4BQ9H444 224 aaKnown RBP11.35□□□□□ -0.59
NUP50-206ENST00000422489 CPA4Q9UI42 421 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 KCNH4Q9UQ05 1017 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 ECM29Q5VYK3 1845 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
NUP50-206ENST00000422489 CTNND1O60716 968 aaKnown RBP11.34□□□□□ -0.59
NUP50-206ENST00000422489 HMMRO75330 724 aa11.34□□□□□ -0.59
NUP50-206ENST00000422489 PLCG2P16885 1265 aa11.34□□□□□ -0.59
NUP50-206ENST00000422489 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
NUP50-206ENST00000422489 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
NUP50-206ENST00000422489 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
NUP50-206ENST00000422489 ZCCHC17Q9NP64 241 aaKnown RBP11.34□□□□□ -0.59
NUP50-206ENST00000422489 TRIM75PA6NK02 468 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 TBC1D12O60347 775 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 IFIT2P09913 472 aaKnown RBP11.33□□□□□ -0.6
NUP50-206ENST00000422489 PPP4CP60510 307 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 CAP1Q01518 475 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 GPAT2Q6NUI2 795 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
NUP50-206ENST00000422489 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 CLASRPQ8N2M8 674 aaKnown RBP11.33□□□□□ -0.6
NUP50-206ENST00000422489 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
NUP50-206ENST00000422489 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms