RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ZMYM1Q5SVZ6 1142 aa10.97□□□□□ -0.65
PDE4D-201ENST00000309641 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
PDE4D-201ENST00000309641 FAM83AQ86UY5 434 aa10.97□□□□□ -0.65
PDE4D-201ENST00000309641 FAM151AQ8WW52 585 aa10.97□□□□□ -0.65
PDE4D-201ENST00000309641 FLT1P17948 1338 aa10.97□□□□□ -0.65
PDE4D-201ENST00000309641 SMIM22K7EJ46 135 aa10.96□□□□□ -0.65
PDE4D-201ENST00000309641 APLP1P51693 650 aa10.96□□□□□ -0.65
PDE4D-201ENST00000309641 NMIQ13287 307 aaPredicted RBP10.96□□□□□ -0.65
PDE4D-201ENST00000309641 IL25Q9H293 177 aa10.96□□□□□ -0.65
PDE4D-201ENST00000309641 SAP30BPQ9UHR5 308 aaKnown RBP10.96□□□□□ -0.65
PDE4D-201ENST00000309641 GTF3C3Q9Y5Q9 886 aa10.96□□□□□ -0.65
PDE4D-201ENST00000309641 TRPM7Q96QT4 1865 aa10.96□□□□□ -0.65
PDE4D-201ENST00000309641 GPAA1O43292 621 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 ZFYP08048 801 aaPredicted RBP10.96□□□□□ -0.66
PDE4D-201ENST00000309641 PLCG2P16885 1265 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 TNNI2P48788 182 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 MIGA2Q7L4E1 593 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 AIDAQ96BJ3 306 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 STRBPQ96SI9 672 aaKnown RBP10.96□□□□□ -0.66
PDE4D-201ENST00000309641 OSBPL5Q9H0X9 879 aaPredicted RBP10.96□□□□□ -0.66
PDE4D-201ENST00000309641 MKRN1Q9UHC7 482 aaKnown RBP10.96□□□□□ -0.66
PDE4D-201ENST00000309641 PALD1Q9ULE6 856 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 AK9Q5TCS8 1911 aa10.96□□□□□ -0.66
PDE4D-201ENST00000309641 FAM196BA6NMK8 535 aa10.95□□□□□ -0.66
PDE4D-201ENST00000309641 FOXP2O15409 715 aa10.95□□□□□ -0.66
PDE4D-201ENST00000309641 ENTPD3O75355 529 aa10.95□□□□□ -0.66
PDE4D-201ENST00000309641 USP5P45974 858 aa10.95□□□□□ -0.66
PDE4D-201ENST00000309641 TMED8Q6PL24 325 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-201ENST00000309641 ZNF589Q86UQ0 364 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-201ENST00000309641 ZSCAN29Q8IWY8 852 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-201ENST00000309641 PPP2R3BQ9Y5P8 575 aa10.95□□□□□ -0.66
PDE4D-201ENST00000309641 FOCADQ5VW36 1801 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 UBE2Q2LH0YL09 131 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 HSPA6P17066 643 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 VPS53Q5VIR6 699 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 CSRNP1Q96S65 589 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 GBA2Q9HCG7 927 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 DCP1AQ9NPI6 582 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 SLC4A4Q9Y6R1 1079 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 ATRNL1Q5VV63 1379 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 CYP2D7A0A087X1C5 515 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 GSG1L2A8MUP6 293 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 CYP2D6P10635 497 aa10.94□□□□□ -0.66
PDE4D-201ENST00000309641 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
PDE4D-201ENST00000309641 BAZ2AQ9UIF9 1905 aaKnown RBP10.93□□□□□ -0.66
PDE4D-201ENST00000309641 PLCD1P51178 756 aa10.93□□□□□ -0.66
PDE4D-201ENST00000309641 TTLL12Q14166 644 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-201ENST00000309641 LRRFIP1Q32MZ4 808 aaKnown RBP10.93□□□□□ -0.66
PDE4D-201ENST00000309641 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
PDE4D-201ENST00000309641 SAPCD2Q86UD0 394 aa10.93□□□□□ -0.66
PDE4D-201ENST00000309641 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
PDE4D-201ENST00000309641 SIPA1L1O43166 1804 aa10.93□□□□□ -0.66
PDE4D-201ENST00000309641 CHMLP26374 656 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 DNAJC18Q9H819 358 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 DIAPH3Q9NSV4 1193 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 MCM9Q9NXL9 1143 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
PDE4D-201ENST00000309641 RPAP1Q9BWH6 1393 aaPredicted RBP10.92□□□□□ -0.66
PDE4D-201ENST00000309641 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
PDE4D-201ENST00000309641 MYH1P12882 1939 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 HUNKP57058 714 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 RRP1BQ14684 758 aaKnown RBP10.92□□□□□ -0.66
PDE4D-201ENST00000309641 MCMDC2Q4G0Z9 681 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 CERS3Q8IU89 383 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 C2orf69Q8N8R5 385 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 CLMNQ96JQ2 1002 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 TLL2Q9Y6L7 1015 aa10.92□□□□□ -0.66
PDE4D-201ENST00000309641 NAV1Q8NEY1 1877 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 USP17L21D6R901 530 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
PDE4D-201ENST00000309641 NF2P35240 595 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 SHROOM1Q2M3G4 852 aaPredicted RBP10.91□□□□□ -0.66
PDE4D-201ENST00000309641 KLRG1Q96E93 195 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.91□□□□□ -0.66
PDE4D-201ENST00000309641 APPP05067 770 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 INPP5BP32019 993 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 MAP3K10Q02779 954 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 CTR9Q6PD62 1173 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.91□□□□□ -0.66
PDE4D-201ENST00000309641 SLC44A5Q8NCS7 719 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 ZKSCAN4Q969J2 545 aaPredicted RBP10.91□□□□□ -0.66
PDE4D-201ENST00000309641 DYNLL2Q96FJ2 89 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 ATP8A2Q9NTI2 1148 aa10.91□□□□□ -0.66
PDE4D-201ENST00000309641 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 COL2A1P02458 1487 aaPredicted RBP10.9□□□□□ -0.66
PDE4D-201ENST00000309641 CCDC171Q6TFL3 1326 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 PHF20L1A8MW92 1017 aa10.9□□□□□ -0.66
PDE4D-201ENST00000309641 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
PDE4D-201ENST00000309641 JAG1P78504 1218 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 871.7 ms