RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 ZSWIM5Q9P217 1185 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 NAP1L2Q9ULW6 460 aaPredicted RBP11.93□□□□□ -0.5
SEC24D-201ENST00000280551 PRKAB2O43741 272 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 NACAP1Q9BZK3 213 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 RNF41Q9H4P4 317 aaPredicted RBP11.93□□□□□ -0.5
SEC24D-201ENST00000280551 PHF14O94880 888 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 CYP7A1P22680 504 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 MRE11P49959 708 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 C7orf43Q8WVR3 580 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 POLLQ9UGP5 575 aa11.93□□□□□ -0.5
SEC24D-201ENST00000280551 GPR75-ASB3A0A0A6YYF3 556 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 FUT2Q10981 343 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 SLC4A4Q9Y6R1 1079 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 MROH7-TTC4A0A0A0MT08 1334 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
SEC24D-201ENST00000280551 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
SEC24D-201ENST00000280551 TMTC2Q8N394 836 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
SEC24D-201ENST00000280551 ARPP21Q9UBL0 812 aaPredicted RBP11.92□□□□□ -0.5
SEC24D-201ENST00000280551 RCOR1Q9UKL0 485 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
SEC24D-201ENST00000280551 SLC51AQ86UW1 340 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 NAPBQ9H115 298 aa11.92□□□□□ -0.5
SEC24D-201ENST00000280551 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
SEC24D-201ENST00000280551 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
SEC24D-201ENST00000280551 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
SEC24D-201ENST00000280551 FAM237AA0A1B0GTK4 181 aa11.91□□□□□ -0.5
SEC24D-201ENST00000280551 DTNBO60941 627 aa11.91□□□□□ -0.5
SEC24D-201ENST00000280551 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
SEC24D-201ENST00000280551 IFNAR1P17181 557 aa11.91□□□□□ -0.5
SEC24D-201ENST00000280551 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
SEC24D-201ENST00000280551 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
SEC24D-201ENST00000280551 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
SEC24D-201ENST00000280551 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 GSTO1P78417 241 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 FBXO18Q8NFZ0 1043 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 DDX49Q9Y6V7 483 aaKnown RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 U2AF2P26368 475 aaKnown RBP eCLIP11.9□□□□□ -0.52e-10■■□□□ 14.5
SEC24D-201ENST00000280551 PRDX5P30044 214 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 PDE6BP35913 854 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 HAND2P61296 217 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 FAM177A1Q8N128 213 aaPredicted RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 LRRC2Q9BYS8 371 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 MYO3BQ8WXR4 1341 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 RANBP6O60518 1105 aaKnown RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 FMNL1O95466 1100 aaPredicted RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
SEC24D-201ENST00000280551 MFSD6Q6ZSS7 791 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 TBC1D22AQ8WUA7 517 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 COA1Q9GZY4 146 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 GGA1Q9UJY5 639 aa11.9□□□□□ -0.5
SEC24D-201ENST00000280551 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.51
SEC24D-201ENST00000280551 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 CDC27P30260 824 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 DNM1Q05193 864 aaKnown RBP11.89□□□□□ -0.51
SEC24D-201ENST00000280551 RALYLQ86SE5 291 aaKnown RBP11.89□□□□□ -0.51
SEC24D-201ENST00000280551 MASTLQ96GX5 879 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 B4E1Z4 1266 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SEC24D-201ENST00000280551 RHBDL3P58872 404 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 C12orf60Q5U649 245 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
SEC24D-201ENST00000280551 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
SEC24D-201ENST00000280551 CTDSPL2Q05D32 466 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 PPP1R9BQ96SB3 815 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 GRPEL1Q9HAV7 217 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 RTEL1Q9NZ71 1219 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 GOLGA6L3A6NEY3 463 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 APBA3O96018 575 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 TRDNQ13061 729 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 BRAPQ7Z569 592 aa11.89□□□□□ -0.51
SEC24D-201ENST00000280551 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
SEC24D-201ENST00000280551 COL4A5P29400 1685 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 KRT85P78386 507 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 GRIK5Q16478 980 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 CENPFP49454 3210 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 DDAH1O94760 285 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 SLC15A2Q16348 729 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 PDLIM2Q96JY6 352 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
SEC24D-201ENST00000280551 CDKL5O76039 1030 aa11.88□□□□□ -0.51
SEC24D-201ENST00000280551 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
SEC24D-201ENST00000280551 TROAPQ12815 778 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 USP34Q70CQ2 3546 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms