RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TTTY13Q9BZ97 58 aa11.74□□□□□ -0.53
HMGA2-210ENST00000541363 C20orf203Q8NBC4 194 aa11.73□□□□□ -0.53
HMGA2-210ENST00000541363 WDR90Q96KV7 1748 aa11.73□□□□□ -0.53
HMGA2-210ENST00000541363 CHCHD10Q8WYQ3 142 aaPredicted RBP11.73□□□□□ -0.53
HMGA2-210ENST00000541363 HILS1P60008 231 aa11.73□□□□□ -0.53
HMGA2-210ENST00000541363 PMAIP1Q13794 54 aa11.72□□□□□ -0.53
HMGA2-210ENST00000541363 NUPR1O60356 82 aa11.72□□□□□ -0.53
HMGA2-210ENST00000541363 SPRY4Q9C004 299 aa11.72□□□□□ -0.53
HMGA2-210ENST00000541363 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
HMGA2-210ENST00000541363 WFDC13Q8IUB5 93 aa11.71□□□□□ -0.53
HMGA2-210ENST00000541363 MALRD1Q5VYJ5 2156 aa11.71□□□□□ -0.53
HMGA2-210ENST00000541363 ZNF503-AS2A6NEH8 195 aa11.71□□□□□ -0.53
HMGA2-210ENST00000541363 TMEM89A2RUT3 159 aa11.71□□□□□ -0.53
HMGA2-210ENST00000541363 RITA1Q96K30 269 aa11.71□□□□□ -0.53
HMGA2-210ENST00000541363 CTSZQ9UBR2 303 aa11.7□□□□□ -0.54
HMGA2-210ENST00000541363 PRAC2D3DTV9 90 aa11.7□□□□□ -0.54
HMGA2-210ENST00000541363 DHRS4-AS1Q9P1J3 65 aa11.7□□□□□ -0.54
HMGA2-210ENST00000541363 C1orf147Q96MC9 270 aaPredicted RBP11.7□□□□□ -0.54
HMGA2-210ENST00000541363 WFDC10AQ9H1F0 79 aa11.7□□□□□ -0.54
HMGA2-210ENST00000541363 UBE2D2P62837 147 aa11.69□□□□□ -0.54
HMGA2-210ENST00000541363 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
HMGA2-210ENST00000541363 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
HMGA2-210ENST00000541363 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
HMGA2-210ENST00000541363 IGHV4-61A0A0C4DH41 118 aa11.69□□□□□ -0.54
HMGA2-210ENST00000541363 IMUPQ9GZP8 106 aa11.69□□□□□ -0.54
HMGA2-210ENST00000541363 MUC4Q99102 2169 aa11.68□□□□□ -0.54
HMGA2-210ENST00000541363 KIAA1549LQ6ZVL6 1849 aa11.68□□□□□ -0.54
HMGA2-210ENST00000541363 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.68□□□□□ -0.54
HMGA2-210ENST00000541363 SPATA12Q7Z6I5 190 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 P0DMU3 169 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 LY6G6EA0A0G2JKS1 128 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 MAP6D1Q9H9H5 199 aa11.67□□□□□ -0.54
HMGA2-210ENST00000541363 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
HMGA2-210ENST00000541363 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
HMGA2-210ENST00000541363 C2orf16Q68DN1 1984 aa11.66□□□□□ -0.54
HMGA2-210ENST00000541363 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
HMGA2-210ENST00000541363 DEFB131BA0A096LNP1 70 aa11.66□□□□□ -0.54
HMGA2-210ENST00000541363 SLX1AQ9BQ83 275 aa11.66□□□□□ -0.54
HMGA2-210ENST00000541363 LINC00467Q9BRT7 94 aa11.65□□□□□ -0.54
HMGA2-210ENST00000541363 A0A0J9YX75 114 aa11.65□□□□□ -0.54
HMGA2-210ENST00000541363 ODF3L1Q8IXM7 274 aa11.65□□□□□ -0.54
HMGA2-210ENST00000541363 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
HMGA2-210ENST00000541363 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
HMGA2-210ENST00000541363 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.55
HMGA2-210ENST00000541363 PROK2Q9HC23 129 aa11.65□□□□□ -0.55
HMGA2-210ENST00000541363 IGLV9-49A0A0B4J1Y8 123 aa11.64□□□□□ -0.55
HMGA2-210ENST00000541363 FAM215AQ9Y5M1 114 aa11.64□□□□□ -0.55
HMGA2-210ENST00000541363 LY6LH3BQJ8 138 aa11.64□□□□□ -0.55
HMGA2-210ENST00000541363 PATE2Q6UY27 113 aa11.64□□□□□ -0.55
HMGA2-210ENST00000541363 TRBV30A0A0K0K1B3 111 aa11.64□□□□□ -0.55
HMGA2-210ENST00000541363 PPDPFQ9H3Y8 114 aa11.64□□□□□ -0.55
HMGA2-210ENST00000541363 LINC00308Q8TCZ7 52 aa11.63□□□□□ -0.55
HMGA2-210ENST00000541363 SMIM26A0A096LP01 95 aa11.63□□□□□ -0.55
HMGA2-210ENST00000541363 TRIAP1O43715 76 aa11.63□□□□□ -0.55
HMGA2-210ENST00000541363 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
HMGA2-210ENST00000541363 IGKV2-28A0A075B6P5 120 aa11.63□□□□□ -0.55
HMGA2-210ENST00000541363 IGKV2D-28P01615 120 aa11.63□□□□□ -0.55
HMGA2-210ENST00000541363 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 NUP210LQ5VU65 1888 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 X6R8D5 127 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 COX7CP15954 63 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 IGLV3-1P01715 115 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 C10orf25Q5T742 122 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 COL4A5P29400 1685 aa11.62□□□□□ -0.55
HMGA2-210ENST00000541363 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 MIFP14174 115 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 C6orf99Q4VX62 202 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 TRBV7-6A0A0J9YX20 115 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 C11orf53Q8IXP5 236 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
HMGA2-210ENST00000541363 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
HMGA2-210ENST00000541363 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
HMGA2-210ENST00000541363 M0R378 163 aa11.6□□□□□ -0.55
HMGA2-210ENST00000541363 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
HMGA2-210ENST00000541363 CACNA1HO95180 2353 aa11.59□□□□□ -0.55
HMGA2-210ENST00000541363 Q6ZTI0 123 aa11.59□□□□□ -0.55
HMGA2-210ENST00000541363 DEFB1P60022 68 aa11.58□□□□□ -0.55
HMGA2-210ENST00000541363 RSPO1Q2MKA7 263 aaPredicted RBP11.58□□□□□ -0.56
HMGA2-210ENST00000541363 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
HMGA2-210ENST00000541363 TP53TG3Q9ULZ0 132 aa11.58□□□□□ -0.56
HMGA2-210ENST00000541363 EBI3Q14213 229 aa11.58□□□□□ -0.56
HMGA2-210ENST00000541363 ESRGQ1W209 222 aa11.58□□□□□ -0.56
HMGA2-210ENST00000541363 GRNP28799 593 aaKnown RBP11.58□□□□□ -0.56
HMGA2-210ENST00000541363 SPRNQ5BIV9 151 aa11.58□□□□□ -0.56
HMGA2-210ENST00000541363 LINC00474Q9P2X8 69 aa11.58□□□□□ -0.56
HMGA2-210ENST00000541363 CEP192Q8TEP8 1941 aa11.57□□□□□ -0.56
HMGA2-210ENST00000541363 C22orf34Q6ZV56 151 aa11.57□□□□□ -0.56
HMGA2-210ENST00000541363 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
HMGA2-210ENST00000541363 DSCAMO60469 2012 aa11.57□□□□□ -0.56
HMGA2-210ENST00000541363 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 MRPS12O15235 138 aaKnown RBP11.56□□□□□ -0.56
HMGA2-210ENST00000541363 GVINP1Q7Z2Y8 2422 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 LINC01548A6NM66 108 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms