RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 COL5A3P25940 1745 aaPredicted RBP6.15□□□□□ -1.42
CTNND1-231ENST00000532463 PKDREJQ9NTG1 2253 aa6.15□□□□□ -1.43
CTNND1-231ENST00000532463 SMAD5-AS1Q9Y6J3 95 aa6.15□□□□□ -1.43
CTNND1-231ENST00000532463 TNS1Q9HBL0 1735 aaKnown RBP6.15□□□□□ -1.43
CTNND1-231ENST00000532463 ADAMTS7Q9UKP4 1686 aa6.15□□□□□ -1.43
CTNND1-231ENST00000532463 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 PTPRDP23468 1912 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 ZNF73O43830 326 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-231ENST00000532463 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 NTM-AS1Q6ZSK4 140 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 NRGNQ92686 78 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 hDV103S1A0JD37 113 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 Q0VFX4 171 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 DOCK8Q8NF50 2099 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 TNRC6BQ9UPQ9 1833 aaKnown RBP6.14□□□□□ -1.43
CTNND1-231ENST00000532463 IGHV7-81A0A0B4J1V7 117 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 C19orf71A6NCJ1 209 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 DEFB4AO15263 64 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 C5orf56Q8N8D9 126 aa6.14□□□□□ -1.43
CTNND1-231ENST00000532463 IGKV2-28A0A075B6P5 120 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 IGKV2D-28P01615 120 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 PARP14Q460N5 1801 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 MYCNOSP40205 109 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 DOCK3Q8IZD9 2030 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 C10orf25Q5T742 122 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 Q8N6K4 173 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 C11orf45Q8TAV5 145 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 LINC00467Q9BRT7 94 aa6.13□□□□□ -1.43
CTNND1-231ENST00000532463 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 A0A0J9YX75 114 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 YLPM1P49750 1951 aaKnown RBP6.12□□□□□ -1.43
CTNND1-231ENST00000532463 LOC285556D6RIA3 1793 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 A0A1B0GU69 56 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 A6NDX4 124 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 H0Y9P7 68 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 LINC01547P58512 204 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-231ENST00000532463 COL6A6A6NMZ7 2263 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 TMEM105Q8N8V8 129 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 TMEM89A2RUT3 159 aa6.12□□□□□ -1.43
CTNND1-231ENST00000532463 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.12□□□□□ -1.439e-7■■■□□ 18
CTNND1-231ENST00000532463 INSL3P51460 131 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 MAPKAPK5-AS1Q8N8E1 139 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 TET1Q8NFU7 2136 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 GTF3C1Q12789 2109 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 WNK1Q9H4A3 2382 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 Q8N3U1 123 aa6.11□□□□□ -1.43
CTNND1-231ENST00000532463 A0A087WVE0 104 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 CCDC140Q96MF4 163 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 A0A0G2JMZ2 1700 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 LRRC37A2A6NM11 1700 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 LRRC37AA6NMS7 1700 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 DYSFO75923 2080 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 C17orf82Q86X59 251 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-231ENST00000532463 ODF3Q96PU9 254 aa6.1□□□□□ -1.43
CTNND1-231ENST00000532463 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
CTNND1-231ENST00000532463 IGLV1-44P01699 117 aa6.09□□□□□ -1.43
CTNND1-231ENST00000532463 FRMD6-AS1P0C7T7 363 aa6.09□□□□□ -1.43
CTNND1-231ENST00000532463 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
CTNND1-231ENST00000532463 IGLV4-69A0A075B6H9 119 aa6.09□□□□□ -1.43
CTNND1-231ENST00000532463 TRBV10-3A0A0K0K1G6 114 aa6.09□□□□□ -1.43
CTNND1-231ENST00000532463 PLA2G2EQ9NZK7 142 aa6.09□□□□□ -1.43
CTNND1-231ENST00000532463 C1orf137Q5JT78 98 aa6.09□□□□□ -1.44
CTNND1-231ENST00000532463 CTSZQ9UBR2 303 aa6.09□□□□□ -1.44
CTNND1-231ENST00000532463 SBF2Q86WG5 1849 aa6.09□□□□□ -1.44
CTNND1-231ENST00000532463 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-231ENST00000532463 PLAC8L1A1L4L8 177 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 COX17Q14061 63 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 Q6ZTI0 123 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 C4orf3Q8WVX3 66 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 ZGRF1Q86YA3 2104 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 EML6Q6ZMW3 1958 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 TNCP24821 2201 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 LCTP09848 1927 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 LOC100131303A0A0U1RQF7 123 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 PTPRQQ9UMZ3 2332 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 TRBV6-8A0A0A6YYG3 113 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 SCN10AQ9Y5Y9 1956 aa6.08□□□□□ -1.44
CTNND1-231ENST00000532463 CD164L2Q6UWJ8 174 aa6.07□□□□□ -1.44
CTNND1-231ENST00000532463 BRCA1P38398 1863 aaKnown RBP6.07□□□□□ -1.44
CTNND1-231ENST00000532463 TNFRSF13BO14836 293 aaPredicted RBP6.07□□□□□ -1.44
CTNND1-231ENST00000532463 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
CTNND1-231ENST00000532463 MAP6D1Q9H9H5 199 aa6.07□□□□□ -1.44
CTNND1-231ENST00000532463 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
CTNND1-231ENST00000532463 WDR90Q96KV7 1748 aa6.07□□□□□ -1.44
CTNND1-231ENST00000532463 ODF3L1Q8IXM7 274 aa6.07□□□□□ -1.44
CTNND1-231ENST00000532463 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 PRSS33Q8NF86 280 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 ZNF702PQ9H963 129 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 PROK2Q9HC23 129 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 HILS1P60008 231 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 PRLHP81277 87 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 DEFB131BA0A096LNP1 70 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 RPL28P46779 137 aaKnown RBP6.06□□□□□ -1.44
CTNND1-231ENST00000532463 EIF4EBP1Q13541 118 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-231ENST00000532463 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
CTNND1-231ENST00000532463 CNOT1A5YKK6 2376 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms