RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 FAM30AQ9NZY2 134 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 Q9UF83 564 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 A0A1B0GUV1 79 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 SSTP61278 116 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 MEF2BQ02080 365 aaPredicted RBP5.09□□□□□ -1.59
CD44-211ENST00000442151 GAGE6Q13070 117 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 TEX261Q6UWH6 196 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 ENHOQ6UWT2 76 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 PGLYRP4Q96LB8 373 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 NIT2Q9NQR4 276 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 PKIGQ9Y2B9 76 aa5.09□□□□□ -1.59
CD44-211ENST00000442151 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.6
CD44-211ENST00000442151 OXTP01178 125 aa5.09□□□□□ -1.6
CD44-211ENST00000442151 RBX1P62877 108 aa5.09□□□□□ -1.6
CD44-211ENST00000442151 WFDC2Q14508 124 aa5.09□□□□□ -1.6
CD44-211ENST00000442151 MPV17L2Q567V2 206 aa5.09□□□□□ -1.6
CD44-211ENST00000442151 PRR34Q9NV39 138 aa5.09□□□□□ -1.6
CD44-211ENST00000442151 KIF25-AS1Q9Y6Z4 181 aa5.09□□□□□ -1.6
CD44-211ENST00000442151 DMBT1Q9UGM3 2413 aaPredicted RBP5.08□□□□□ -1.6
CD44-211ENST00000442151 USP17L23D6RBM5 183 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 M0QY20 66 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 NCR2O95944 276 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 HLA-DQA1P01909 254 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 IGLC6P0CF74 106 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 BLOC1S1P78537 153 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 COTL1Q14019 142 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 LINC00269Q8N2A0 174 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 C9orf62Q8N4C0 152 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 BORCS7Q96B45 105 aa5.08□□□□□ -1.6
CD44-211ENST00000442151 MUC21A0A0G2JKD1 596 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 MUC21A0A140T8X8 626 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 C19orf71A6NCJ1 209 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 H7C423 109 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 BCL2P10415 239 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 REG3AQ06141 175 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 TWIST1Q15672 202 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 SERTAD4-AS1Q5TG53 156 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 SUMO4Q6EEV6 95 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 SCXQ7RTU7 201 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 TCTE3Q8IZS6 198 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 C9orf163Q8N9P6 203 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 DPH3Q96FX2 82 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 RNF185Q96GF1 192 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 RAB19A4D1S5 217 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 NTF3P20783 257 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 AMTP48728 403 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 HAMPP81172 84 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 SMAGPQ0VAQ4 97 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 LYZL1Q6UWQ5 148 aa5.07□□□□□ -1.6
CD44-211ENST00000442151 NKX2-5P52952 324 aaPredicted RBP5.06□□□□□ -1.6
CD44-211ENST00000442151 AMMECR1LQ6DCA0 310 aa5.06□□□□□ -1.6
CD44-211ENST00000442151 NTM-AS1Q6ZSK4 140 aa5.06□□□□□ -1.6
CD44-211ENST00000442151 NUDT10Q8NFP7 164 aa5.06□□□□□ -1.6
CD44-211ENST00000442151 CIRBP-AS1Q8TBR5 109 aa5.06□□□□□ -1.6
CD44-211ENST00000442151 NUDT11Q96G61 164 aa5.06□□□□□ -1.6
CD44-211ENST00000442151 RPP21Q9H633 154 aaKnown RBP5.06□□□□□ -1.6
CD44-211ENST00000442151 IGHV3-64A0A075B6Q5 118 aa5.05□□□□□ -1.6
CD44-211ENST00000442151 A8MWL6 223 aa5.05□□□□□ -1.6
CD44-211ENST00000442151 GATCO43716 136 aaKnown RBP5.05□□□□□ -1.6
CD44-211ENST00000442151 NDUFS6O75380 124 aaKnown RBP5.05□□□□□ -1.6
CD44-211ENST00000442151 RPL37AP61513 92 aaKnown RBP5.05□□□□□ -1.6
CD44-211ENST00000442151 TMEM101Q96IK0 257 aa5.05□□□□□ -1.6
CD44-211ENST00000442151 BTF3L4Q96K17 158 aa5.05□□□□□ -1.6
CD44-211ENST00000442151 hDV102S1A0JD36 115 aa5.04□□□□□ -1.6
CD44-211ENST00000442151 TMEM250H0YL14 139 aa5.04□□□□□ -1.6
CD44-211ENST00000442151 PRSS1P07477 247 aa5.04□□□□□ -1.6
CD44-211ENST00000442151 CTRLP40313 264 aa5.04□□□□□ -1.6
CD44-211ENST00000442151 CNBPP62633 177 aaKnown RBP5.04□□□□□ -1.6
CD44-211ENST00000442151 CNFNQ9BYD5 112 aa5.04□□□□□ -1.6
CD44-211ENST00000442151 PPP1R17O96001 155 aa5.04□□□□□ -1.6
CD44-211ENST00000442151 ZNF25P17030 456 aaPredicted RBP5.04□□□□□ -1.6
CD44-211ENST00000442151 APCSP02743 223 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 PMCHP20382 165 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 LINC01620Q4KN68 170 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 Q6ZNX1 250 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 FAM231DQ6ZW35 169 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 C20orf203Q8NBC4 194 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 OCC1Q8TAD7 63 aa5.03□□□□□ -1.6
CD44-211ENST00000442151 I3L3M4 83 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 TNFRSF6BO95407 300 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 C7orf33Q8WU49 177 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 IGLV10-54A0A075B6I4 117 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 FAM231BA6NCW3 169 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 CCL25O15444 150 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 RPS10P46783 165 aaKnown RBP5.02□□□□□ -1.61
CD44-211ENST00000442151 FOXA3P55318 350 aaPredicted RBP5.02□□□□□ -1.61
CD44-211ENST00000442151 RNASEKQ6P5S7 137 aaKnown RBP5.02□□□□□ -1.61
CD44-211ENST00000442151 SDIM1Q6ZPB5 146 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 ST20Q9HBF5 79 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 LINC00474Q9P2X8 69 aa5.02□□□□□ -1.61
CD44-211ENST00000442151 GAGE12HA6NDE8 117 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 SS18Q15532 418 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 Q6ZRU5 148 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 AKAP14Q86UN6 197 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 GATD1Q8NB37 220 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 EIF5A2Q9GZV4 153 aaKnown RBP5.01□□□□□ -1.61
CD44-211ENST00000442151 GFRA4Q9GZZ7 299 aa5.01□□□□□ -1.61
CD44-211ENST00000442151 FLG2Q5D862 2391 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms