RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
HIPK3-202ENST00000379016 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
HIPK3-202ENST00000379016 COL4A6Q14031 1691 aa10.16□□□□□ -0.78
HIPK3-202ENST00000379016 C4orf3Q8WVX3 66 aa10.16□□□□□ -0.78
HIPK3-202ENST00000379016 PRLHP81277 87 aa10.16□□□□□ -0.78
HIPK3-202ENST00000379016 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
HIPK3-202ENST00000379016 EML5Q05BV3 1969 aa10.16□□□□□ -0.78
HIPK3-202ENST00000379016 IGLV2-8P01709 118 aa10.15□□□□□ -0.78
HIPK3-202ENST00000379016 MIAQ16674 131 aa10.15□□□□□ -0.78
HIPK3-202ENST00000379016 SOSTDC1Q6X4U4 206 aa10.15□□□□□ -0.78
HIPK3-202ENST00000379016 Q8TCH9 128 aa10.15□□□□□ -0.78
HIPK3-202ENST00000379016 CTRLP40313 264 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 CELA1Q9UNI1 258 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 LINC00526Q96FQ7 95 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 COL4A1P02462 1669 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 E9PLD3 99 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 MYCNOSP40205 109 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 Q6ZR03 302 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 RITA1Q96K30 269 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 NLRC5Q86WI3 1866 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 BEAN1Q3B7T3 259 aa10.14□□□□□ -0.79
HIPK3-202ENST00000379016 ATP5EP56381 51 aaPredicted RBP10.13□□□□□ -0.79
HIPK3-202ENST00000379016 B3GALT5-AS1P59052 145 aa10.13□□□□□ -0.79
HIPK3-202ENST00000379016 NHSL1Q5SYE7 1610 aa10.13□□□□□ -0.79
HIPK3-202ENST00000379016 C10orf25Q5T742 122 aa10.13□□□□□ -0.79
HIPK3-202ENST00000379016 NDUFC1O43677 76 aa10.13□□□□□ -0.79
HIPK3-202ENST00000379016 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
HIPK3-202ENST00000379016 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 IGHV6-1A0A0B4J1U7 121 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 FSHBP01225 129 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 PSPHP1O15172 72 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 IGLV2-11P01706 119 aa10.12□□□□□ -0.79
HIPK3-202ENST00000379016 QRFPP83859 136 aa10.11□□□□□ -0.79
HIPK3-202ENST00000379016 LINC00311Q8N616 119 aa10.11□□□□□ -0.79
HIPK3-202ENST00000379016 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
HIPK3-202ENST00000379016 MT-ATP8P03928 68 aa10.1□□□□□ -0.79
HIPK3-202ENST00000379016 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
HIPK3-202ENST00000379016 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
HIPK3-202ENST00000379016 ZNF503-AS2A6NEH8 195 aa10.1□□□□□ -0.79
HIPK3-202ENST00000379016 C5orf56Q8N8D9 126 aa10.1□□□□□ -0.79
HIPK3-202ENST00000379016 IGHV7-81A0A0B4J1V7 117 aa10.1□□□□□ -0.79
HIPK3-202ENST00000379016 Q6ZS49 121 aa10.1□□□□□ -0.79
HIPK3-202ENST00000379016 COL11A2P13942 1736 aaPredicted RBP10.09□□□□□ -0.79
HIPK3-202ENST00000379016 SPRNQ5BIV9 151 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 IGLV2-14P01704 120 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 EBI3Q14213 229 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 C6orf99Q4VX62 202 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 Q6ZTI0 123 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 C15orf65H3BRN8 121 aa10.09□□□□□ -0.79
HIPK3-202ENST00000379016 COA6Q5JTJ3 125 aaKnown RBP10.09□□□□□ -0.79
HIPK3-202ENST00000379016 CFAP126Q5VTH2 177 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 CDPF1Q6NVV7 123 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 ZNF843Q8N446 348 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 TDRG1Q3Y452 100 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 Q6ZQY7 126 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 LINC00208Q96KT6 92 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 NAV3Q8IVL0 2385 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 LINC00482Q8N8I6 264 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 TMEM131Q92545 1883 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 CSRP3P50461 194 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 LINC00467Q9BRT7 94 aa10.08□□□□□ -0.8
HIPK3-202ENST00000379016 MAP6D1Q9H9H5 199 aa10.07□□□□□ -0.8
HIPK3-202ENST00000379016 CRYGAP11844 174 aa10.07□□□□□ -0.8
HIPK3-202ENST00000379016 INSL3P51460 131 aa10.07□□□□□ -0.8
HIPK3-202ENST00000379016 KIF26AQ9ULI4 1882 aaPredicted RBP10.07□□□□□ -0.8
HIPK3-202ENST00000379016 LINC00337Q8N6G1 96 aa10.07□□□□□ -0.8
HIPK3-202ENST00000379016 A0A0J9YXY3 114 aa10.06□□□□□ -0.8
HIPK3-202ENST00000379016 INAFM1C9JVW0 142 aa10.06□□□□□ -0.8
HIPK3-202ENST00000379016 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
HIPK3-202ENST00000379016 RNASE8Q8TDE3 154 aaKnown RBP10.05□□□□□ -0.8
HIPK3-202ENST00000379016 ZNF106Q9H2Y7 1883 aaKnown RBP10.05□□□□□ -0.8
HIPK3-202ENST00000379016 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
HIPK3-202ENST00000379016 FOXL2NBQ6ZUU3 175 aa10.05□□□□□ -0.8
HIPK3-202ENST00000379016 DENND4CQ5VZ89 1909 aa10.04□□□□□ -0.8
HIPK3-202ENST00000379016 SBSPONQ8IVN8 264 aa10.04□□□□□ -0.8
HIPK3-202ENST00000379016 PATE2Q6UY27 113 aa10.04□□□□□ -0.8
HIPK3-202ENST00000379016 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
HIPK3-202ENST00000379016 ATP5EP2Q5VTU8 51 aa10.03□□□□□ -0.8
HIPK3-202ENST00000379016 ANAPC1Q9H1A4 1944 aa10.03□□□□□ -0.8
HIPK3-202ENST00000379016 PLXNB3Q9ULL4 1909 aa10.03□□□□□ -0.8
HIPK3-202ENST00000379016 ZSWIM8A7E2V4 1837 aa10.03□□□□□ -0.8
HIPK3-202ENST00000379016 ZNF73O43830 326 aaPredicted RBP10.02□□□□□ -0.81
HIPK3-202ENST00000379016 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
HIPK3-202ENST00000379016 CRIP2P52943 208 aaPredicted RBP10.02□□□□□ -0.81
HIPK3-202ENST00000379016 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
HIPK3-202ENST00000379016 VPREB1P12018 145 aa10.02□□□□□ -0.81
HIPK3-202ENST00000379016 PLXNA3P51805 1871 aa10.02□□□□□ -0.81
HIPK3-202ENST00000379016 I3L2K1 104 aa10.02□□□□□ -0.81
HIPK3-202ENST00000379016 K7EIM0 57 aa10.01□□□□□ -0.81
HIPK3-202ENST00000379016 TRAV10A0A0B4J240 114 aa10.01□□□□□ -0.81
HIPK3-202ENST00000379016 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
HIPK3-202ENST00000379016 IGLV11-55A0A075B6I3 123 aa10.01□□□□□ -0.81
HIPK3-202ENST00000379016 LINC01547P58512 204 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms