RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TOR2AQ5JU69 321 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 ALKAL2Q6UX46 152 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 FER1L6-AS1Q8NA97 138 aa12.29□□□□□ -0.44
CLN6-204ENST00000564752 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
CLN6-204ENST00000564752 F5H697 171 aa12.28□□□□□ -0.44
CLN6-204ENST00000564752 P01737 135 aa12.28□□□□□ -0.44
CLN6-204ENST00000564752 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
CLN6-204ENST00000564752 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
CLN6-204ENST00000564752 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
CLN6-204ENST00000564752 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
CLN6-204ENST00000564752 FLG2Q5D862 2391 aaPredicted RBP12.28□□□□□ -0.44
CLN6-204ENST00000564752 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
CLN6-204ENST00000564752 RBFOX3A6NFN3 312 aa12.27□□□□□ -0.45
CLN6-204ENST00000564752 IGLC6P0CF74 106 aa12.27□□□□□ -0.45
CLN6-204ENST00000564752 NIT1Q86X76 327 aa12.27□□□□□ -0.45
CLN6-204ENST00000564752 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.45
CLN6-204ENST00000564752 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
CLN6-204ENST00000564752 BLOC1S1P78537 153 aa12.26□□□□□ -0.45
CLN6-204ENST00000564752 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
CLN6-204ENST00000564752 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.26□□□□□ -0.45
CLN6-204ENST00000564752 A0A087WX48 190 aa12.25□□□□□ -0.45
CLN6-204ENST00000564752 CACNG7P62955 275 aa12.25□□□□□ -0.45
CLN6-204ENST00000564752 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
CLN6-204ENST00000564752 MGPP08493 103 aa12.24□□□□□ -0.45
CLN6-204ENST00000564752 WFDC2Q14508 124 aa12.24□□□□□ -0.45
CLN6-204ENST00000564752 CHCHD7Q9BUK0 85 aa12.24□□□□□ -0.45
CLN6-204ENST00000564752 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
CLN6-204ENST00000564752 F2Z2F3 143 aa12.23□□□□□ -0.45
CLN6-204ENST00000564752 NKX2-5P52952 324 aaPredicted RBP12.22□□□□□ -0.45
CLN6-204ENST00000564752 ELOBQ15370 118 aa12.22□□□□□ -0.45
CLN6-204ENST00000564752 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
CLN6-204ENST00000564752 RMI2Q96E14 147 aa12.22□□□□□ -0.45
CLN6-204ENST00000564752 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
CLN6-204ENST00000564752 KLK12Q9UKR0 248 aa12.22□□□□□ -0.45
CLN6-204ENST00000564752 TMEM250H0YL14 139 aa12.21□□□□□ -0.45
CLN6-204ENST00000564752 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
CLN6-204ENST00000564752 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
CLN6-204ENST00000564752 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.45
CLN6-204ENST00000564752 COX11Q9Y6N1 276 aa12.21□□□□□ -0.45
CLN6-204ENST00000564752 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
CLN6-204ENST00000564752 H7C1H1 209 aa12.2□□□□□ -0.46
CLN6-204ENST00000564752 K7EN84 100 aa12.2□□□□□ -0.46
CLN6-204ENST00000564752 TMEM97Q5BJF2 176 aa12.2□□□□□ -0.46
CLN6-204ENST00000564752 LYPD6BQ8NI32 183 aa12.2□□□□□ -0.46
CLN6-204ENST00000564752 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
CLN6-204ENST00000564752 A0A1B0GVG6 124 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 LECT2O14960 151 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 CTRLP40313 264 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 Q6ZSA8 131 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 OCC1Q8TAD7 63 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 UBE2WQ96B02 151 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
CLN6-204ENST00000564752 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 M0QY20 66 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 NTF3P20783 257 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 CEBPGP53567 150 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 PKIAP61925 76 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
CLN6-204ENST00000564752 MPV17L2Q567V2 206 aa12.17□□□□□ -0.46
CLN6-204ENST00000564752 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
CLN6-204ENST00000564752 CRPP02741 224 aa12.16□□□□□ -0.46
CLN6-204ENST00000564752 Q0VG73 95 aa12.16□□□□□ -0.46
CLN6-204ENST00000564752 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
CLN6-204ENST00000564752 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
CLN6-204ENST00000564752 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
CLN6-204ENST00000564752 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
CLN6-204ENST00000564752 TWIST1Q15672 202 aa12.15□□□□□ -0.46
CLN6-204ENST00000564752 RASL11AQ6T310 242 aa12.15□□□□□ -0.46
CLN6-204ENST00000564752 NTM-AS1Q6ZSK4 140 aa12.15□□□□□ -0.46
CLN6-204ENST00000564752 C15orf54Q8N8G6 183 aa12.15□□□□□ -0.46
CLN6-204ENST00000564752 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
CLN6-204ENST00000564752 J3QL48 77 aa12.14□□□□□ -0.47
CLN6-204ENST00000564752 GATCO43716 136 aaKnown RBP12.14□□□□□ -0.47
CLN6-204ENST00000564752 ANGP03950 147 aaKnown RBP12.14□□□□□ -0.47
CLN6-204ENST00000564752 Q8N976 141 aa12.14□□□□□ -0.47
CLN6-204ENST00000564752 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
CLN6-204ENST00000564752 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
CLN6-204ENST00000564752 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
CLN6-204ENST00000564752 FAM231DQ6ZW35 169 aa12.13□□□□□ -0.47
CLN6-204ENST00000564752 FAM210AQ96ND0 272 aa12.13□□□□□ -0.47
CLN6-204ENST00000564752 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
CLN6-204ENST00000564752 C1orf43Q9BWL3 253 aa12.13□□□□□ -0.47
CLN6-204ENST00000564752 GAGE6Q13070 117 aa12.12□□□□□ -0.47
CLN6-204ENST00000564752 IQCJQ1A5X6 159 aa12.12□□□□□ -0.47
CLN6-204ENST00000564752 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
CLN6-204ENST00000564752 GTSF1Q8WW33 167 aa12.12□□□□□ -0.47
CLN6-204ENST00000564752 NDUFS6O75380 124 aaKnown RBP12.11□□□□□ -0.47
CLN6-204ENST00000564752 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
CLN6-204ENST00000564752 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
CLN6-204ENST00000564752 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
CLN6-204ENST00000564752 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
CLN6-204ENST00000564752 A8MWL6 223 aa12.1□□□□□ -0.47
CLN6-204ENST00000564752 RBX1P62877 108 aa12.1□□□□□ -0.47
CLN6-204ENST00000564752 ZNF727A8MUV8 499 aa12.09□□□□□ -0.47
CLN6-204ENST00000564752 MIAQ16674 131 aa12.09□□□□□ -0.47
CLN6-204ENST00000564752 CT83Q5H943 113 aa12.09□□□□□ -0.47
CLN6-204ENST00000564752 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
CLN6-204ENST00000564752 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms