RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 DPH3Q96FX2 82 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 ZC2HC1AQ96GY0 325 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 CYYR1Q96J86 154 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BNQ99877 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HIST1H2BMQ99879 126 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 HDHD3Q9BSH5 251 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 C16orf95Q9H693 158 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 NAA60Q9H7X0 242 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF286AQ9HBT8 521 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 TAS2R4Q9NYW5 299 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 LSM2Q9Y333 95 aaKnown RBP2.78□□□□□ -1.96
LRRC28-222ENST00000561431 LINC00312Q9Y6C7 94 aa2.78□□□□□ -1.96
LRRC28-222ENST00000561431 IGHV3-74A0A0B4J1X5 117 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 TRBV27A0A0K0K1C4 114 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 CLPSL1A2RUU4 121 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 C9JCJ5 164 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 NDUFC2-KCTD14E9PQ53 114 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 H3BUX3 64 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 TMEM256-PLSCR3K7ERE1 68 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 GEMIN2O14893 280 aaKnown RBP2.77□□□□□ -1.97
LRRC28-222ENST00000561431 PIN1P1O15428 100 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 CYB5AP00167 134 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 PMP2P02689 132 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 CGB3P0DN86 165 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 CGB7P0DN87 165 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 CRYBB3P26998 211 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 EDDM3BP56851 147 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 INSL4Q14641 139 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 IQCJQ1A5X6 159 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 PIGYQ3MUY2 71 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 Q6AWC8 147 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 ATOH7Q8N100 152 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 SVBPQ8N300 66 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 LINC00311Q8N616 119 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 BPIFB6Q8NFQ5 453 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 OR10P1Q8NGE3 313 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 OR5C1Q8NGR4 320 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 OR5H2Q8NGV7 314 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 LINC01006Q8NI28 216 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 COPS9Q8WXC6 57 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF714Q96N38 554 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 VAMP8Q9BV40 100 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 LINC00574Q9H8X3 128 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 KLK5Q9Y337 293 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-222ENST00000561431 KIF25-AS1Q9Y6Z4 181 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 MGAM2Q2M2H8 2515 aa2.77□□□□□ -1.97
LRRC28-222ENST00000561431 TRAV12-2A0A075B6T6 113 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 ODAMA1E959 279 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 A6NDX4 124 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 TMEM262E9PQX1 116 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 H3BMG7 143 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 BUB1B-PAK6H3BSN5 160 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 UQCRQO14949 82 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 IGLV1-47P01700 117 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 DNAH10OSP0CZ25 163 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 PYYP10082 97 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 HLA-DRB4P13762 266 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 CXCL5P42830 114 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 DYNLT3P51808 116 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 AKR1C2P52895 323 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 UBE2BP63146 152 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF90Q03938 601 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 ATP5G2Q06055 141 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 EBI3Q14213 229 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF846Q147U1 533 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 Q5BKY6 102 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 AADACL3Q5VUY0 350 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 MRPL54Q6P161 138 aaKnown RBP2.76□□□□□ -1.97
LRRC28-222ENST00000561431 HEPN1Q6WQI6 88 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 Q6ZUT4 128 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 SCXQ7RTU7 201 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 TEN1Q86WV5 123 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 Q8N2B8 174 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 SLC25A29Q8N8R3 303 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 NPBQ8NG41 125 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 LINC00526Q96FQ7 95 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 SEC11CQ9BY50 192 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 FKBP11Q9NYL4 201 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 HLA-DRB4X5D2U9 266 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 DSCAML1Q8TD84 2053 aa2.76□□□□□ -1.97
LRRC28-222ENST00000561431 WNK2Q9Y3S1 2297 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 TRGV10A0A0A0MS01 117 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 A0A0J9YXY3 114 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 A8MU10 97 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 MRPS14O60783 128 aaKnown RBP2.75□□□□□ -1.97
LRRC28-222ENST00000561431 MT-ND6P03923 174 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 GZMBP10144 247 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 CRYGAP11844 174 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 YPEL3P61236 119 aaPredicted RBP2.75□□□□□ -1.97
LRRC28-222ENST00000561431 HBBP68871 147 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 LY6EQ16553 131 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 MPV17LQ2QL34 196 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 MINOS1Q5TGZ0 78 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 LINC01545Q5VT33 79 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 TMEM91Q6ZNR0 172 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 RNF182Q8N6D2 247 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF645Q8N7E2 425 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 OR4A5Q8NH83 315 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 C7orf33Q8WU49 177 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms