RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 A0A087WX48 190 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 MUC21A0A0G2JKD1 596 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 KRTAP10-2P60368 255 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 NEXN-AS1Q8NBZ9 246 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 NUDT10Q8NFP7 164 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 NUDT11Q96G61 164 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
HDAC4-216ENST00000544989 Q9UF83 564 aa7.94□□□□□ -1.14
HDAC4-216ENST00000544989 GZMBP10144 247 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 CTRLP40313 264 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 NKX2-5P52952 324 aaPredicted RBP7.93□□□□□ -1.14
HDAC4-216ENST00000544989 LYZL1Q6UWQ5 148 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 FAM231DQ6ZW35 169 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 NIT1Q86X76 327 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 OCC1Q8TAD7 63 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
HDAC4-216ENST00000544989 FAM210AQ96ND0 272 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 CNFNQ9BYD5 112 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 Q9HAA7 133 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
HDAC4-216ENST00000544989 TRBV6-8A0A0A6YYG3 113 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 A0A1B0GVG6 124 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 A8MWL6 223 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 SSTP61278 116 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 Q0VG73 95 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 SMIM15Q7Z3B0 74 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 DPH3P1Q9H4G8 78 aa7.92□□□□□ -1.14
HDAC4-216ENST00000544989 K7EN84 100 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 GATCO43716 136 aaKnown RBP7.91□□□□□ -1.14
HDAC4-216ENST00000544989 MGPP08493 103 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 NTF3P20783 257 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 CEBPGP53567 150 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 CT83Q5H943 113 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 FRZBQ92765 325 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 SMIM7Q9BQ49 75 aa7.91□□□□□ -1.14
HDAC4-216ENST00000544989 RNASE7Q9H1E1 156 aaKnown RBP7.91□□□□□ -1.14
HDAC4-216ENST00000544989 TMEM262E9PQX1 116 aa7.9□□□□□ -1.14
HDAC4-216ENST00000544989 M0QY20 66 aa7.9□□□□□ -1.14
HDAC4-216ENST00000544989 TWIST1Q15672 202 aa7.9□□□□□ -1.14
HDAC4-216ENST00000544989 FAM74A3Q4VXF1 159 aa7.9□□□□□ -1.14
HDAC4-216ENST00000544989 BORCS7Q96B45 105 aa7.9□□□□□ -1.14
HDAC4-216ENST00000544989 DMBT1Q9UGM3 2413 aaPredicted RBP7.9□□□□□ -1.15
HDAC4-216ENST00000544989 TRBV25-1A0A075B6N4 114 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 LRCOL1A6NCL2 159 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 ZNF727A8MUV8 499 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 SUMO4Q6EEV6 95 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 RASL11AQ6T310 242 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 TEX261Q6UWH6 196 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 CHCHD5Q9BSY4 110 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 SMDT1Q9H4I9 107 aa7.89□□□□□ -1.15
HDAC4-216ENST00000544989 FAM231BA6NCW3 169 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 CRPP02741 224 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 LINC01551Q86U37 167 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 C15orf54Q8N8G6 183 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 GFRA4Q9GZZ7 299 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 NIT2Q9NQR4 276 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 KLK12Q9UKR0 248 aa7.88□□□□□ -1.15
HDAC4-216ENST00000544989 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 IGHV1-24A0A0C4DH33 117 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 SRP19P09132 144 aaKnown RBP7.87□□□□□ -1.15
HDAC4-216ENST00000544989 GCSHP23434 173 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 FOXA3P55318 350 aaPredicted RBP7.87□□□□□ -1.15
HDAC4-216ENST00000544989 PEA15Q15121 130 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 IQCJQ1A5X6 159 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 Q8N3U1 123 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 Q8N814 137 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 UBE2WQ96B02 151 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 PGLYRP4Q96LB8 373 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 OSTCQ9NRP0 149 aa7.87□□□□□ -1.15
HDAC4-216ENST00000544989 IGKV2D-24A0A075B6R9 120 aa7.86□□□□□ -1.15
HDAC4-216ENST00000544989 ATRAIDQ6UW56 229 aa7.86□□□□□ -1.15
HDAC4-216ENST00000544989 Q8N976 141 aa7.86□□□□□ -1.15
HDAC4-216ENST00000544989 TSKUQ8WUA8 353 aa7.86□□□□□ -1.15
HDAC4-216ENST00000544989 GTSF1Q8WW33 167 aa7.86□□□□□ -1.15
HDAC4-216ENST00000544989 C1orf43Q9BWL3 253 aa7.86□□□□□ -1.15
HDAC4-216ENST00000544989 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
HDAC4-216ENST00000544989 MIAQ16674 131 aa7.85□□□□□ -1.15
HDAC4-216ENST00000544989 TMEM241Q24JQ0 296 aa7.85□□□□□ -1.15
HDAC4-216ENST00000544989 C14orf177Q52M58 125 aa7.85□□□□□ -1.15
HDAC4-216ENST00000544989 MAPKAPK5-AS1Q8N8E1 139 aa7.85□□□□□ -1.15
HDAC4-216ENST00000544989 A0A1B0GUT8 65 aa7.84□□□□□ -1.15
HDAC4-216ENST00000544989 COTL1Q14019 142 aa7.84□□□□□ -1.15
HDAC4-216ENST00000544989 MPV17L2Q567V2 206 aa7.84□□□□□ -1.15
HDAC4-216ENST00000544989 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
HDAC4-216ENST00000544989 TMEM243Q9BU79 118 aa7.84□□□□□ -1.15
HDAC4-216ENST00000544989 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
HDAC4-216ENST00000544989 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 A0A1B0GUV1 79 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 UBE2L6O14933 153 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 NCR2O95944 276 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 Q8N1X5 172 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 TMEM70Q9BUB7 260 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
HDAC4-216ENST00000544989 RBX1P62877 108 aa7.82□□□□□ -1.16
HDAC4-216ENST00000544989 GAGE6Q13070 117 aa7.82□□□□□ -1.16
HDAC4-216ENST00000544989 GATD1Q8NB37 220 aa7.82□□□□□ -1.16
HDAC4-216ENST00000544989 ISOC2Q96AB3 205 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms