RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 TEP1Q99973 2627 aaKnown RBP13.27□□□□□ -0.29
TNFAIP1-202ENST00000544907 OR11H12B2RN74 326 aa13.26□□□□□ -0.29
TNFAIP1-202ENST00000544907 PMVKQ15126 192 aa13.26□□□□□ -0.29
TNFAIP1-202ENST00000544907 ZNF56Q15929 161 aa13.26□□□□□ -0.29
TNFAIP1-202ENST00000544907 OR11H2Q8NH07 326 aa13.26□□□□□ -0.29
TNFAIP1-202ENST00000544907 MAP6D1Q9H9H5 199 aa13.26□□□□□ -0.29
TNFAIP1-202ENST00000544907 TP53TG1Q9Y2A0 90 aa13.26□□□□□ -0.29
TNFAIP1-202ENST00000544907 MTORP42345 2549 aa13.25□□□□□ -0.29
TNFAIP1-202ENST00000544907 KNCNA6PVL3 124 aa13.25□□□□□ -0.29
TNFAIP1-202ENST00000544907 K7EP13 123 aa13.25□□□□□ -0.29
TNFAIP1-202ENST00000544907 CRLF1O75462 422 aa13.25□□□□□ -0.29
TNFAIP1-202ENST00000544907 MORN3Q6PF18 240 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP1-202ENST00000544907 OR4C5Q8NGB2 326 aa13.25□□□□□ -0.29
TNFAIP1-202ENST00000544907 A8MWV9 139 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 TCTAP57738 103 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 FAM74A4Q5TZK3 123 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 FN1P02751 2386 aaKnown RBP13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 M0R2P5 195 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 TSHBP01222 138 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
TNFAIP1-202ENST00000544907 MYMXA0A1B0GTQ4 84 aa13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 I3L3M4 83 aa13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 KHDC1LQ5JSQ8 128 aa13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 CEND1Q8N111 149 aa13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 SPXQ9BT56 116 aa13.23□□□□□ -0.29
TNFAIP1-202ENST00000544907 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
TNFAIP1-202ENST00000544907 TRAV8-6A0A0B4J262 113 aa13.22□□□□□ -0.29
TNFAIP1-202ENST00000544907 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
TNFAIP1-202ENST00000544907 AMMECR1LQ6DCA0 310 aa13.22□□□□□ -0.29
TNFAIP1-202ENST00000544907 CST9LQ9H4G1 147 aa13.22□□□□□ -0.29
TNFAIP1-202ENST00000544907 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.29
TNFAIP1-202ENST00000544907 GTF2H5Q6ZYL4 71 aa13.21□□□□□ -0.29
TNFAIP1-202ENST00000544907 NEGR1Q7Z3B1 354 aa13.21□□□□□ -0.29
TNFAIP1-202ENST00000544907 MAPKAPK5-AS1Q8N8E1 139 aa13.21□□□□□ -0.29
TNFAIP1-202ENST00000544907 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.3
TNFAIP1-202ENST00000544907 INSP01308 110 aa13.21□□□□□ -0.3
TNFAIP1-202ENST00000544907 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.3
TNFAIP1-202ENST00000544907 HERVK_113P61574 105 aa13.21□□□□□ -0.3
TNFAIP1-202ENST00000544907 CD300EQ496F6 205 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP1-202ENST00000544907 TTTY13Q9BZ97 58 aa13.21□□□□□ -0.3
TNFAIP1-202ENST00000544907 RHODO00212 210 aa13.2□□□□□ -0.3
TNFAIP1-202ENST00000544907 GCSHP23434 173 aa13.2□□□□□ -0.3
TNFAIP1-202ENST00000544907 CRYBA4P53673 196 aa13.2□□□□□ -0.3
TNFAIP1-202ENST00000544907 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP1-202ENST00000544907 DUX3Q96PT4 197 aa13.2□□□□□ -0.3
TNFAIP1-202ENST00000544907 MXRA5Q9NR99 2828 aa13.2□□□□□ -0.3
TNFAIP1-202ENST00000544907 C11orf86A6NJI1 115 aa13.19□□□□□ -0.3
TNFAIP1-202ENST00000544907 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
TNFAIP1-202ENST00000544907 FXYD2P54710 66 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 BEAN1Q3B7T3 259 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 NFE4Q86UQ8 179 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 PRADC1Q9BSG0 188 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 ESM1Q9NQ30 184 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 PYGO1Q9Y3Y4 419 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 TSSC4Q9Y5U2 329 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 CCL24O00175 119 aa13.18□□□□□ -0.3
TNFAIP1-202ENST00000544907 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
TNFAIP1-202ENST00000544907 RPL39P62891 51 aaKnown RBP13.17□□□□□ -0.3
TNFAIP1-202ENST00000544907 C11orf72Q8NBR9 251 aa13.17□□□□□ -0.3
TNFAIP1-202ENST00000544907 ZNF418Q8TF45 676 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP1-202ENST00000544907 DNAJC30Q96LL9 226 aa13.17□□□□□ -0.3
TNFAIP1-202ENST00000544907 TRBV7-3A0A075B6L6 115 aa13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 A0A1W2PPM0 123 aa13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 P0DMU3 169 aa13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 FAM231AP0DMU4 169 aa13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 FAM231CP0DMU5 169 aa13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 FAM110AQ9BQ89 295 aa13.16□□□□□ -0.3
TNFAIP1-202ENST00000544907 H3BUT2 72 aa13.15□□□□□ -0.3
TNFAIP1-202ENST00000544907 K7EP34 96 aa13.15□□□□□ -0.3
TNFAIP1-202ENST00000544907 ODF3L2Q3SX64 289 aa13.15□□□□□ -0.3
TNFAIP1-202ENST00000544907 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
TNFAIP1-202ENST00000544907 A0A1B0GWB2 263 aa13.15□□□□□ -0.31
TNFAIP1-202ENST00000544907 LINC01587Q99440 93 aa13.15□□□□□ -0.31
TNFAIP1-202ENST00000544907 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
TNFAIP1-202ENST00000544907 FABP2P12104 132 aa13.13□□□□□ -0.31
TNFAIP1-202ENST00000544907 CFAP126Q5VTH2 177 aa13.13□□□□□ -0.31
TNFAIP1-202ENST00000544907 LINC01006Q8NI28 216 aa13.13□□□□□ -0.31
TNFAIP1-202ENST00000544907 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
TNFAIP1-202ENST00000544907 RS1O15537 224 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 IGHV3-53P01767 116 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 CD28P10747 220 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 SAMD5Q5TGI4 173 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 STHQ8IWL8 128 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 AGRNO00468 2067 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 CUBNO60494 3623 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 ZNF815PA8K554 130 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 NDUFA7O95182 113 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 HILS1P60008 231 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 IL17DQ8TAD2 202 aa13.12□□□□□ -0.31
TNFAIP1-202ENST00000544907 NIPBLQ6KC79 2804 aaeCLIP13.11□□□□□ -0.31
TNFAIP1-202ENST00000544907 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms