RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
SQLE-205ENST00000521232 COX11Q9Y6N1 276 aa11.31□□□□□ -0.6
SQLE-205ENST00000521232 A0A087WX48 190 aa11.3□□□□□ -0.6
SQLE-205ENST00000521232 XKRY2A2RUG3 117 aa11.3□□□□□ -0.6
SQLE-205ENST00000521232 P01737 135 aa11.3□□□□□ -0.6
SQLE-205ENST00000521232 ELOBQ15370 118 aa11.3□□□□□ -0.6
SQLE-205ENST00000521232 KLK12Q9UKR0 248 aa11.3□□□□□ -0.6
SQLE-205ENST00000521232 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 F2Z2F3 143 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 CACNG7P62955 275 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 WFDC2Q14508 124 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.29□□□□□ -0.6
SQLE-205ENST00000521232 RMI2Q96E14 147 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 TPPP3Q9BW30 176 aa11.29□□□□□ -0.6
SQLE-205ENST00000521232 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
SQLE-205ENST00000521232 NUDT10Q8NFP7 164 aa11.28□□□□□ -0.6
SQLE-205ENST00000521232 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
SQLE-205ENST00000521232 DNAJC30Q96LL9 226 aa11.28□□□□□ -0.6
SQLE-205ENST00000521232 TMEM262E9PQX1 116 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 WDR73Q6P4I2 378 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 ATRAIDQ6UW56 229 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 ALKAL2Q6UX46 152 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 LYPD6BQ8NI32 183 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
SQLE-205ENST00000521232 M0QY20 66 aa11.26□□□□□ -0.61
SQLE-205ENST00000521232 NTM-AS1Q6ZSK4 140 aa11.26□□□□□ -0.61
SQLE-205ENST00000521232 OCC1Q8TAD7 63 aa11.26□□□□□ -0.61
SQLE-205ENST00000521232 BAALCQ8WXS3 180 aa11.26□□□□□ -0.61
SQLE-205ENST00000521232 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
SQLE-205ENST00000521232 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
SQLE-205ENST00000521232 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
SQLE-205ENST00000521232 NTF3P20783 257 aa11.25□□□□□ -0.61
SQLE-205ENST00000521232 Q0VG73 95 aa11.25□□□□□ -0.61
SQLE-205ENST00000521232 TMEM250H0YL14 139 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 H7C1H1 209 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 K7EN84 100 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 LECT2O14960 151 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 MGPP08493 103 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 TRGC1P0CF51 173 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 PKIAP61925 76 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 MPV17L2Q567V2 206 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 ENHOQ6UWT2 76 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
SQLE-205ENST00000521232 CTRLP40313 264 aa11.23□□□□□ -0.61
SQLE-205ENST00000521232 Q8N976 141 aa11.23□□□□□ -0.61
SQLE-205ENST00000521232 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
SQLE-205ENST00000521232 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
SQLE-205ENST00000521232 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
SQLE-205ENST00000521232 DPH3P1Q9H4G8 78 aa11.22□□□□□ -0.61
SQLE-205ENST00000521232 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
SQLE-205ENST00000521232 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
SQLE-205ENST00000521232 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
SQLE-205ENST00000521232 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
SQLE-205ENST00000521232 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
SQLE-205ENST00000521232 FAM30AQ9NZY2 134 aa11.21□□□□□ -0.61
SQLE-205ENST00000521232 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.2□□□□□ -0.62
SQLE-205ENST00000521232 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
SQLE-205ENST00000521232 TWIST1Q15672 202 aa11.2□□□□□ -0.62
SQLE-205ENST00000521232 FRZBQ92765 325 aa11.2□□□□□ -0.62
SQLE-205ENST00000521232 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
SQLE-205ENST00000521232 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
SQLE-205ENST00000521232 CRPP02741 224 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
SQLE-205ENST00000521232 NKX2-5P52952 324 aaPredicted RBP11.19□□□□□ -0.62
SQLE-205ENST00000521232 RBX1P62877 108 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 Q5VSD8 79 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 C1orf43Q9BWL3 253 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 PRR34Q9NV39 138 aa11.19□□□□□ -0.62
SQLE-205ENST00000521232 HAMPP81172 84 aa11.18□□□□□ -0.62
SQLE-205ENST00000521232 GAGE6Q13070 117 aa11.18□□□□□ -0.62
SQLE-205ENST00000521232 MIAQ16674 131 aa11.18□□□□□ -0.62
SQLE-205ENST00000521232 Q6ZSA8 131 aa11.18□□□□□ -0.62
SQLE-205ENST00000521232 FAM231DQ6ZW35 169 aa11.18□□□□□ -0.62
SQLE-205ENST00000521232 A0A1B0GVG6 124 aa11.17□□□□□ -0.62
SQLE-205ENST00000521232 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
SQLE-205ENST00000521232 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
SQLE-205ENST00000521232 EIF5A2Q9GZV4 153 aaKnown RBP11.16□□□□□ -0.62
SQLE-205ENST00000521232 A8MWL6 223 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 FAM229AH3BQW9 127 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 INAFM2P0DMQ5 153 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 CEBPGP53567 150 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
SQLE-205ENST00000521232 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 LINC00269Q8N2A0 174 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
SQLE-205ENST00000521232 A0A1B0GUV1 79 aa11.14□□□□□ -0.63
SQLE-205ENST00000521232 CT83Q5H943 113 aa11.14□□□□□ -0.63
SQLE-205ENST00000521232 KRTAP26-1Q6PEX3 210 aa11.14□□□□□ -0.63
SQLE-205ENST00000521232 TMEM243Q9BU79 118 aa11.14□□□□□ -0.63
SQLE-205ENST00000521232 LINC01620Q4KN68 170 aa11.13□□□□□ -0.63
SQLE-205ENST00000521232 SMIM15Q7Z3B0 74 aa11.13□□□□□ -0.63
SQLE-205ENST00000521232 SMIM7Q9BQ49 75 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms