RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IFNA1P01562 189 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 GZMBP10144 247 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 BCL2P10415 239 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 RPS20P60866 119 aaKnown RBP6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 KCNIP4Q6PIL6 250 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 Q6ZSA8 131 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 UBE2WQ96B02 151 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 VAX2Q9UIW0 290 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 RAB19A4D1S5 217 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 F5H697 171 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 Q6ZNX1 250 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 FER1L6-AS1Q8NA97 138 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 BAALCQ8WXS3 180 aa6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 DAZAP1Q96EP5 407 aaKnown RBP6.88□□□□□ -1.31
HMGXB3-205ENST00000514469 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 P01737 135 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 SSTP61278 116 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 PKIAP61925 76 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 CACNG7P62955 275 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 Q0VG73 95 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 TMEM97Q5BJF2 176 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 Q8N976 141 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 MED9Q9NWA0 146 aa6.87□□□□□ -1.31
HMGXB3-205ENST00000514469 XKRY2A2RUG3 117 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 TMEM262E9PQX1 116 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 M0QY20 66 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 MGPP08493 103 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 TAGLN2P37802 199 aaKnown RBP6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 C9orf62Q8N4C0 152 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 C15orf54Q8N8G6 183 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 BIN3Q9NQY0 253 aa6.86□□□□□ -1.31
HMGXB3-205ENST00000514469 F2Z2F3 143 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 FAM229AH3BQW9 127 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 H7C1H1 209 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 CRPP02741 224 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 ANGP03950 147 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 CTRLP40313 264 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 IQCJQ1A5X6 159 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 SUMO4Q6EEV6 95 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 AKAP14Q86UN6 197 aa6.85□□□□□ -1.31
HMGXB3-205ENST00000514469 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 TRGC1P0CF51 173 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 CNFNQ9BYD5 112 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 PRR34Q9NV39 138 aa6.84□□□□□ -1.31
HMGXB3-205ENST00000514469 IGHV1-24A0A0C4DH33 117 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 K7EN84 100 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 RBX1P62877 108 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 MIAQ16674 131 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 LINC01620Q4KN68 170 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 C14orf177Q52M58 125 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 WDR73Q6P4I2 378 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 RASL11AQ6T310 242 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 DPH3P1Q9H4G8 78 aa6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
HMGXB3-205ENST00000514469 NTF3P20783 257 aa6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 NKX2-5P52952 324 aaPredicted RBP6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 GAGE6Q13070 117 aa6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 ALKAL2Q6UX46 152 aa6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 LYPD6BQ8NI32 183 aa6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
HMGXB3-205ENST00000514469 hCG_2014768A0A024R1R8 64 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 USP17L23D6RBM5 183 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 HLA-DQA1P01909 254 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 CLPSL2Q6UWE3 100 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 OCC1Q8TAD7 63 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 NIT2Q9NQR4 276 aa6.81□□□□□ -1.32
HMGXB3-205ENST00000514469 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
HMGXB3-205ENST00000514469 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
HMGXB3-205ENST00000514469 TMEM243Q9BU79 118 aa6.8□□□□□ -1.32
HMGXB3-205ENST00000514469 A0A1B0GUV1 79 aa6.79□□□□□ -1.32
HMGXB3-205ENST00000514469 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-205ENST00000514469 PRSS1P07477 247 aa6.79□□□□□ -1.32
HMGXB3-205ENST00000514469 REG3AQ06141 175 aa6.79□□□□□ -1.32
HMGXB3-205ENST00000514469 TWIST1Q15672 202 aa6.79□□□□□ -1.32
HMGXB3-205ENST00000514469 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
HMGXB3-205ENST00000514469 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms