RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 OR10G8Q8NGN5 311 aa13.86□□□□□ -0.19
SRM-202ENST00000459997 FAM210AQ96ND0 272 aa13.86□□□□□ -0.19
SRM-202ENST00000459997 EIF5A2Q9GZV4 153 aaKnown RBP13.86□□□□□ -0.19
SRM-202ENST00000459997 A0A087WX48 190 aa13.85□□□□□ -0.19
SRM-202ENST00000459997 LECT2O14960 151 aa13.85□□□□□ -0.19
SRM-202ENST00000459997 P01737 135 aa13.85□□□□□ -0.19
SRM-202ENST00000459997 NEXN-AS1Q8NBZ9 246 aa13.85□□□□□ -0.19
SRM-202ENST00000459997 KLK12Q9UKR0 248 aa13.85□□□□□ -0.19
SRM-202ENST00000459997 F5H697 171 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 IGLC6P0CF74 106 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 HAMPP81172 84 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 KCNIP4Q6PIL6 250 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 NUDT10Q8NFP7 164 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 RMI2Q96E14 147 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 NUDT11Q96G61 164 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 TMEM70Q9BUB7 260 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 TPPP3Q9BW30 176 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 RNASE7Q9H1E1 156 aaKnown RBP13.84□□□□□ -0.19
SRM-202ENST00000459997 COX11Q9Y6N1 276 aa13.84□□□□□ -0.19
SRM-202ENST00000459997 RPS20P60866 119 aaKnown RBP13.83□□□□□ -0.2
SRM-202ENST00000459997 Q5VSD8 79 aa13.83□□□□□ -0.2
SRM-202ENST00000459997 FRZBQ92765 325 aa13.83□□□□□ -0.2
SRM-202ENST00000459997 DNAJC30Q96LL9 226 aa13.83□□□□□ -0.2
SRM-202ENST00000459997 CHCHD7Q9BUK0 85 aa13.83□□□□□ -0.2
SRM-202ENST00000459997 BIN3Q9NQY0 253 aa13.83□□□□□ -0.2
SRM-202ENST00000459997 SMIM17P0DL12 118 aa13.82□□□□□ -0.2
SRM-202ENST00000459997 ELOBQ15370 118 aa13.82□□□□□ -0.2
SRM-202ENST00000459997 FER1L6-AS1Q8NA97 138 aa13.82□□□□□ -0.2
SRM-202ENST00000459997 AP1S3Q96PC3 154 aa13.82□□□□□ -0.2
SRM-202ENST00000459997 IGKV2D-24A0A075B6R9 120 aa13.81□□□□□ -0.2
SRM-202ENST00000459997 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
SRM-202ENST00000459997 SMR3BP02814 79 aaPredicted RBP13.81□□□□□ -0.2
SRM-202ENST00000459997 SRP19P09132 144 aaKnown RBP13.81□□□□□ -0.2
SRM-202ENST00000459997 BAALCQ8WXS3 180 aa13.81□□□□□ -0.2
SRM-202ENST00000459997 UBE2WQ96B02 151 aa13.81□□□□□ -0.2
SRM-202ENST00000459997 TMEM262E9PQX1 116 aa13.8□□□□□ -0.2
SRM-202ENST00000459997 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.8□□□□□ -0.2
SRM-202ENST00000459997 KIF25-AS1Q9Y6Z4 181 aa13.8□□□□□ -0.2
SRM-202ENST00000459997 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.79□□□□□ -0.2
SRM-202ENST00000459997 LYZL1Q6UWQ5 148 aa13.79□□□□□ -0.2
SRM-202ENST00000459997 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
SRM-202ENST00000459997 RPP21Q9H633 154 aaKnown RBP13.79□□□□□ -0.2
SRM-202ENST00000459997 XKRY2A2RUG3 117 aa13.78□□□□□ -0.2
SRM-202ENST00000459997 C9JQL5 133 aa13.77□□□□□ -0.21
SRM-202ENST00000459997 NDUFS6O75380 124 aaKnown RBP13.77□□□□□ -0.21
SRM-202ENST00000459997 MGPP08493 103 aa13.77□□□□□ -0.21
SRM-202ENST00000459997 INAFM2P0DMQ5 153 aa13.77□□□□□ -0.21
SRM-202ENST00000459997 SRSF3P84103 164 aaKnown RBP13.77□□□□□ -0.21
SRM-202ENST00000459997 CHCHD5Q9BSY4 110 aa13.77□□□□□ -0.21
SRM-202ENST00000459997 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.21
SRM-202ENST00000459997 Q0VG73 95 aa13.76□□□□□ -0.21
SRM-202ENST00000459997 MPV17L2Q567V2 206 aa13.76□□□□□ -0.21
SRM-202ENST00000459997 C15orf54Q8N8G6 183 aa13.76□□□□□ -0.21
SRM-202ENST00000459997 FAT1Q14517 4588 aa13.76□□□□□ -0.21
SRM-202ENST00000459997 ZNF727A8MUV8 499 aa13.75□□□□□ -0.21
SRM-202ENST00000459997 F2Z2F3 143 aa13.75□□□□□ -0.21
SRM-202ENST00000459997 CACNG7P62955 275 aa13.75□□□□□ -0.21
SRM-202ENST00000459997 ATRAIDQ6UW56 229 aa13.75□□□□□ -0.21
SRM-202ENST00000459997 Q8N976 141 aa13.75□□□□□ -0.21
SRM-202ENST00000459997 FAM229AH3BQW9 127 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
SRM-202ENST00000459997 CRPP02741 224 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 ANGP03950 147 aaKnown RBP13.74□□□□□ -0.21
SRM-202ENST00000459997 CTRLP40313 264 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 PKIAP61925 76 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 TMEM97Q5BJF2 176 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 NTM-AS1Q6ZSK4 140 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 LINC01551Q86U37 167 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 C1orf43Q9BWL3 253 aa13.74□□□□□ -0.21
SRM-202ENST00000459997 NTF3P20783 257 aa13.73□□□□□ -0.21
SRM-202ENST00000459997 ENHOQ6UWT2 76 aa13.73□□□□□ -0.21
SRM-202ENST00000459997 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
SRM-202ENST00000459997 GTSF1Q8WW33 167 aa13.73□□□□□ -0.21
SRM-202ENST00000459997 H7C1H1 209 aa13.72□□□□□ -0.21
SRM-202ENST00000459997 M0QY20 66 aa13.72□□□□□ -0.21
SRM-202ENST00000459997 SUMO4Q6EEV6 95 aa13.72□□□□□ -0.21
SRM-202ENST00000459997 SRRM2Q9UQ35 2752 aaKnown RBP13.72□□□□□ -0.21
SRM-202ENST00000459997 LINC01620Q4KN68 170 aa13.71□□□□□ -0.21
SRM-202ENST00000459997 VPS13BQ7Z7G8 4022 aa13.7□□□□□ -0.22
SRM-202ENST00000459997 TRBV25-1A0A075B6N4 114 aa13.7□□□□□ -0.22
SRM-202ENST00000459997 TRGC1P0CF51 173 aa13.7□□□□□ -0.22
SRM-202ENST00000459997 Q6ZSA8 131 aa13.7□□□□□ -0.22
SRM-202ENST00000459997 GAGE6Q13070 117 aa13.69□□□□□ -0.22
SRM-202ENST00000459997 PEA15Q15121 130 aa13.69□□□□□ -0.22
SRM-202ENST00000459997 WDR73Q6P4I2 378 aa13.69□□□□□ -0.22
SRM-202ENST00000459997 CNFNQ9BYD5 112 aa13.69□□□□□ -0.22
SRM-202ENST00000459997 A8MWL6 223 aa13.68□□□□□ -0.22
SRM-202ENST00000459997 RBX1P62877 108 aa13.68□□□□□ -0.22
SRM-202ENST00000459997 TWIST1Q15672 202 aa13.68□□□□□ -0.22
SRM-202ENST00000459997 DPH3P1Q9H4G8 78 aa13.68□□□□□ -0.22
SRM-202ENST00000459997 IGHV1-24A0A0C4DH33 117 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 MIAQ16674 131 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 IQCJQ1A5X6 159 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 TMEM241Q24JQ0 296 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 RASL11AQ6T310 242 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 CLPSL2Q6UWE3 100 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 PGLYRP4Q96LB8 373 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 DNAH8Q96JB1 4490 aa13.67□□□□□ -0.22
SRM-202ENST00000459997 HLA-DQA1P01909 254 aa13.66□□□□□ -0.22
SRM-202ENST00000459997 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms