RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SOGA1O94964 1423 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 FLNBO75369 2602 aaKnown RBP-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 ALKQ9UM73 1620 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 MUC12Q9UKN1 5478 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 MYH1P12882 1939 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 A0A087WVE0 104 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM218A2RU14 115 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 RBAKDNA6NC62 111 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 C9orf92A6NGG3 77 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 F8WEM9 126 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 HLA-DRB4P13762 266 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 CMPK1P30085 196 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 EDDM3BP56851 147 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 UBE2L3P68036 154 aaKnown RBP-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 KRTAP6-2Q3LI66 62 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 Q6JHZ5 121 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 COX6B2Q6YFQ2 88 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 Q6ZRX8 168 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 C20orf197Q8N268 126 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 SERP2Q8N6R1 65 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 Q8N8P6 123 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 SPTSSBQ8NFR3 76 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 MAFIPQ8WZ33 124 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 TCEAL4Q96EI5 215 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 USMG5Q96IX5 58 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 SELENOSQ9BQE4 189 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 CNFNQ9BYD5 112 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 BATF3Q9NR55 127 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 FAIMQ9NVQ4 179 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 CRIPTQ9P021 101 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 NDUFA12Q9UI09 145 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 ERG28Q9UKR5 140 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 UBE2D4Q9Y2X8 147 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 HLA-DRB4X5D2U9 266 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 MAGI1Q96QZ7 1491 aaPredicted RBP-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 BICRAQ9NZM4 1560 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 ZNF142P52746 1687 aaPredicted RBP-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 NIPBLQ6KC79 2804 aaeCLIP-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 CASZ1Q86V15 1759 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 STAB2Q8WWQ8 2551 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 UBR5O95071 2799 aaPredicted RBP-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 TENM2Q9NT68 2774 aa-0.12□□□□□ -2.43
PFDN4-202ENST00000441080 PPIP5K1Q6PFW1 1433 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SMG6Q86US8 1419 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 TNS1Q9HBL0 1735 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 ARFGEF1Q9Y6D6 1849 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 NSD1Q96L73 2696 aaPredicted RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 AHCTF1Q8WYP5 2266 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 TNXBP22105 4242 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 GVQW2A0A096LPI5 108 aaPredicted RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 BORCS7-ASMTA0A0B4J1R7 106 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SPTY2D1-AS1A0A0U1RR47 76 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 CRYM-AS1A6NIL9 109 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 FAM223BA6NKX1 122 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 A8MTW9 85 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM14DPA8MWL7 114 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 HCG22E2RYF7 251 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 H7BZZ5 65 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 PPP1R17O96001 155 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 APOC3P02656 99 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SMR3BP02814 79 aaPredicted RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SPART-AS1P0CW21 52 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 ELOF1P60002 83 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 GNGT1P63211 74 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SEC11AP67812 179 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 PRLHP81277 87 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 EMX2Q04743 252 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SSBP1Q04837 148 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 KRTAP19-6Q3LI70 58 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SCIMPQ6UWF3 145 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 COMMD6Q7Z4G1 85 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 WFDC13Q8IUB5 93 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 DEFB106AQ8N104 65 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 C9orf62Q8N4C0 152 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SMIM4Q8WVI0 70 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 AQP10Q96PS8 301 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SPRR2FQ96RM1 72 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SEC11CQ9BY50 192 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 MRPL40Q9NQ50 206 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 DNAJC15Q9Y5T4 150 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 V9GYH0 126 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 PDZD2O15018 2839 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 UNC79Q9P2D8 2635 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 FASNP49327 2511 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 PTPRQQ9UMZ3 2332 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 ZNF236Q9UL36 1845 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 DSPP15924 2871 aaKnown RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 BIVM-ERCC5R4GMW8 1640 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 SETD2Q9BYW2 2564 aaPredicted RBP-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 HMGXB3Q12766 1538 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 CCDC171Q6TFL3 1326 aa-0.13□□□□□ -2.43
PFDN4-202ENST00000441080 FLNAP21333 2647 aaKnown RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 CACNA1AO00555 2505 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 BCORQ6W2J9 1755 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 ACANP16112 2415 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 ABCA2Q9BZC7 2435 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TGP01266 2768 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 SETXQ7Z333 2677 aaKnown RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms